| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0140 |
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| Symbol | |
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| ID | 4012108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 146634 |
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| End bp | 148532 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637939824 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_547003 |
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| Protein GI | 91786051 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.403478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCA CCGTGGCCGA AGCCTCTCAA CCCAGCGCCC TGTACCTGCC CGACAACCGG
GTTGTGGCCG TCAACGACCT GTCGGTGCGC TTCACCACCT CCGAGCGCAC AGTCGATGCG
GTACGCCATC TCTCCTTCCA TGTGGACCGC GGCGAGACCC TGGCCATCGT CGGCGAATCA
GGCTCGGGCA AATCGGTCAC CTCGCTGGCG CTGATGCGCC TGGTCGAGCA TGGCGGCGGC
CGCATCATCA ACGGCAGCAT GGCGTTTCGG CGGCGCAGCG GCGAGGTGCT TGACCTAGCG
CAGGCGCGCA ACGCGACGCT GCGCAGCATT CGGGGCGCAG ACATCGCGAT GATTTTCCAG
GAGCCCATGA CCTCGCTCAA CCCGGTGTTC ACCGCCGGGG ACCAGATTGC CGAATCCATC
CAGGAACATC AGGGAAAAAG CGCGAGCGCC GCACGCGCCG AAGCCCTGCG CATGCTCGAA
CTCGTGCGCA TTCCGGAGGC GCGCAATGTG CTGAGCCGCT ACCCGCACCA GCTCTCGGGC
GGCATGCGCC AGCGCGTGAT GATCGCCATG GCGCTGTCGT GCAAACCCTC GCTGCTGATT
GCCGACGAGC CCACCACGGC ACTGGACGTG ACCATCCAGG CGCAAATCCT GCAACTGATA
CGCGCGCTGC AGGACGAAAT GCGCATGGGC GTGGTCTTCA TCACGCACGA CATGGGCGTG
GTCGCCGAAG TGGCCGACCG CGTGCTGGTG ATGTACCGCG GCGACAAGGT GGAAGAAGGC
GCTTCGGAGG AGGTTTTTGC CCGCCCTCGC CATCCCTACA CGCGCGCACT GCTGTCAGCC
GTGCCACGGC TGGGCGCGAT GGAAGGCACC GAACTGCCGC TCAAATTCGA GTTGCTGCGC
ACCGAAGAGG CCGATGCGGC ACCGCGCGAG GCGGCTCAAC CGCAAGACAC CATCGCACCC
GGCAGCGCAC CGATTTTGCG GGTACAGGAT CTGGTGACGC GCTTTGATGT GCGCAGCGGG
CTTTTTGGCC GCGTGGCACG CCGCGTTCAC GCGGTGGAAA AAGTCAGCTT CGACATCCGA
CCCGGCGAAA CACTAGCGCT GGTCGGTGAA TCGGGTTGCG GCAAGTCCAC CACCGGCCGC
TCGCTGCTGC GCCTGGTCGA AAGCCAGAGC GGCCTCATCG AGTTCGGTGG CCAGAACATC
CGCGACCTGC CCACCAGCAC GCTGCAAGGG CTGCGCCGCA ATATCCAGTT TATCTTCCAG
GACCCGTTTG CCTCGCTGGA CCCGCGTGTC ACCGTCGGCT TTTCCATCAT GGAGCCGCTG
CTGGTGCACA AGATCGCCAA GGGCAAGGAG GCGCAGGCGC GGGTCGACTG GCTGCTCGGC
AAAGTCGGCC TGCCGGCCGA ATACGCCCAG CGCTATCCGC ACGAGTTCTC GGGCGGGCAG
CGTCAGCGCA TCGCCATTGC CCGCGCACTG GCGCTCAACC CCAAGGTGGT GATTGCCGAT
GAGTCGGTGT CGGCGCTCGA CGTCTCGATT CAAGCCCAGA TTGTCAACCT GATGCTGGAC
CTGCAGCGCG AGCTGGGCAT CGCCTTCCTG TTCATCTCGC ACGACATGGC GGTGGTCGAA
CGCATCAGCC ACCGCGTGGC CGTGATGTAC CTGGGCCAGA TCGTCGAGAT CGGCCCGCGC
CGCGCGATTT TTGAAAACCC GCAGCACGCC TACACCCGCA AGCTGATGGC GGCCGTGCCC
GTGGCCGACC CGAGCCGACG CCACTTGAGC CGCCAGTTGA TGTCTGACGA GATTCCCAGC
CCCCTGCGCG CCATTGGCGA CGAGCCCGTC GTGCCGCCGC TGGTGGAAGT CAGCCCCGGC
CATTTTGTGG CGCAGCACCG CATTGCCGGT GCGTATTGA
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| Protein sequence | MQPTVAEASQ PSALYLPDNR VVAVNDLSVR FTTSERTVDA VRHLSFHVDR GETLAIVGES
GSGKSVTSLA LMRLVEHGGG RIINGSMAFR RRSGEVLDLA QARNATLRSI RGADIAMIFQ
EPMTSLNPVF TAGDQIAESI QEHQGKSASA ARAEALRMLE LVRIPEARNV LSRYPHQLSG
GMRQRVMIAM ALSCKPSLLI ADEPTTALDV TIQAQILQLI RALQDEMRMG VVFITHDMGV
VAEVADRVLV MYRGDKVEEG ASEEVFARPR HPYTRALLSA VPRLGAMEGT ELPLKFELLR
TEEADAAPRE AAQPQDTIAP GSAPILRVQD LVTRFDVRSG LFGRVARRVH AVEKVSFDIR
PGETLALVGE SGCGKSTTGR SLLRLVESQS GLIEFGGQNI RDLPTSTLQG LRRNIQFIFQ
DPFASLDPRV TVGFSIMEPL LVHKIAKGKE AQARVDWLLG KVGLPAEYAQ RYPHEFSGGQ
RQRIAIARAL ALNPKVVIAD ESVSALDVSI QAQIVNLMLD LQRELGIAFL FISHDMAVVE
RISHRVAVMY LGQIVEIGPR RAIFENPQHA YTRKLMAAVP VADPSRRHLS RQLMSDEIPS
PLRAIGDEPV VPPLVEVSPG HFVAQHRIAG AY
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