Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0139 |
Symbol | |
ID | 4012107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 145010 |
End bp | 146572 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637939823 |
Product | extracellular solute-binding protein |
Protein accession | YP_547002 |
Protein GI | 91786050 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.382397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAC GTATGACACC GCTTCGACCC AAGGCCCTGG CTGCCAGCCT GCTGGCGCTG CTGGCCCTGG CCTCCACTGG CTCGGCCCTT GCCGCCAAGG ACGTGGTACT GGCCATCGGC GGCCAGCCCG AAACGCTGGA CCCCTACAAC ACCAACACCA CGCTGACCAC GGCAGTCACC AAGTCCTTCT ACCAGGGCCT GTTCGAGTTC GACAAGGACC TCAAAATCCA GAACGTGCTG GCCGAAAGCT ACACCGCCTC CAAAGACGGC CTTGTCTACA CCCTCAAGCT GCGCCAGGGC GTCAAGTTCC ATGACGGCAC CGACTTCAAT GCCGAAGCCG TCAAGGTCAC GCTGGACCGG GTGCTCAACC CCGACAACAA ACTGGCCCGC TTCAACCAGT TCAACCGCGT GGACAAGGTC GAGGCGATTG CACCGTACAG CGTGCGCATC ACGCTCAAGG AGCCTTTTGG CCCCTTCATC AACTCGCTGG CGCACGCCTC GGCCGCGATG ATCTCCCCGA CGGCACTCAA AAAGTACGGC AACAAGGACA TCGCCTTCAA CCCGGTGGGC ACCGGCCCCT TCACTTTTGT GGAGTGGAAG CAGACCGATT TCGTCAAGGT CAGGAAATTC GACGGCTACT GGAAAAAGGG CTACCCCAAG GTCGACAGCG TGACCTGGAA ACCCGTGCTG GAGAACAACA CACGCGCCGC CATGCTGCAG ACCGGCGAAA CCGACTTTGC CTTCCCGCTG CCCTACGAGC AGGCCACCGA ACTGGAGAAA AACGCCAAGC TCAAGCTGGT GAGCGGCCCG TCCATCATCA CGCGCTACCT CAGCTTCAAC ATGCAGCAAA AGCCTTTCGA CAACCTCAAG GTGCGCGAAG CCATCAACTA CGCCATCAAC AAGGAAGCGC TCGCCAAAGT GGCCTTCGGT GGCTATGCCG TCCCGGCCGA GGGCATCGTG CCGCAAGGGG TGAAGTACGC CCACAAGATG GCGCCCTGGC CTTATGACCC GAAGAAGGCG CGCGAGCTGC TCAAGGAAGC CGGTTACGCC AACGGCTTCG AGTCGGTGCT CTGGAGCGCC TACACCACCA CCACCGCGCA GAAAACCATC CAGTTCGTGC AGCAGCAGCT GGCCCAGGTG GGCATCAAGA TCTCGGTGCA GTCACTCGAA CCCGGCCAGC GTACCGAGTG GGTGCAAACC GCGCCGGACC CCAAAACCGC GAAAGTGCGC ATGTACTACG CCGGCTGGTC TTCTTCGACC GGTGAAGCCG ACTGGGCGCT GCGCCCGCTG CTGGCCACCG AAGCCTGGCC GCCCAAGCTG AACAACACCG CCTACTACAG CAACGAGAAG GTGGACGGCG CTATCGCCAA GGCCCTGAAG TCGGTCGATG ACAAGGAAAA AGCCGACCTG TATCGCCAGG CACAGGAGCA GATCATGAAA GACGCGCCCT GGGCGCCGCT GGTGACGGAG AAAAACCTGT ACGCCACAAG CAAGCGCCTG TCGGGCGTCT ACGTGATGCC TGACGGCAAC ATCAATGCGG ACGAGATCGC GGTCGCCGAG TAA
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Protein sequence | MTERMTPLRP KALAASLLAL LALASTGSAL AAKDVVLAIG GQPETLDPYN TNTTLTTAVT KSFYQGLFEF DKDLKIQNVL AESYTASKDG LVYTLKLRQG VKFHDGTDFN AEAVKVTLDR VLNPDNKLAR FNQFNRVDKV EAIAPYSVRI TLKEPFGPFI NSLAHASAAM ISPTALKKYG NKDIAFNPVG TGPFTFVEWK QTDFVKVRKF DGYWKKGYPK VDSVTWKPVL ENNTRAAMLQ TGETDFAFPL PYEQATELEK NAKLKLVSGP SIITRYLSFN MQQKPFDNLK VREAINYAIN KEALAKVAFG GYAVPAEGIV PQGVKYAHKM APWPYDPKKA RELLKEAGYA NGFESVLWSA YTTTTAQKTI QFVQQQLAQV GIKISVQSLE PGQRTEWVQT APDPKTAKVR MYYAGWSSST GEADWALRPL LATEAWPPKL NNTAYYSNEK VDGAIAKALK SVDDKEKADL YRQAQEQIMK DAPWAPLVTE KNLYATSKRL SGVYVMPDGN INADEIAVAE
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