| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0134 |
|---|
| Symbol | |
|---|
| ID | 4012334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 140163 |
|---|
| End bp | 141122 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637939818 |
|---|
| Product | Alpha/beta hydrolase fold-3 |
|---|
| Protein accession | YP_546997 |
|---|
| Protein GI | 91786045 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.729428 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAT CTCCTGTTCG CACCACGCTG GACGCTACGC CTCTCGACCC CGCCTTTGCC
GGTTTTCTGG CCCAAGCTGC GGCCCAGGGA GCCCCCCCTC TGGAGGCCTT GCCGCCTCCC
ATTGCGCGGC AGGTCTACCG GGACCTGGCC AACGCCTTGG GCCTGCCCGC CCCGGCCATT
GGCAAGGTGG AAGATAAAAG CATTCCCGGC CCCGGTGGCG TGCTGCCTTT GCGGGCATAC
AGTCCCACGA CTCAGGGGCC GTGGCCCGTG CTGTTGTACG TGCATGGAGG AGGTTTTGTG
ATGGGCGATC TGCAAACGCA TGACGAGGTC TGCCGCACCC TGTGCCACCT TACGGGCATG
CTGGTCGTGG CGGTGGACTA CCGGCTGGCT CCCGAGCATC CGTTCCCGGC CGCCCCTGAT
GATGCGGAAG CGGCCTTGCG CTGGATCTGC GTCCATGCGG ACACCCTGGG TGGTGACCCG
CATCGCATCG CCGTGGCGGG CGACAGCGCC GGGGCACAGC TGGCCCTGGT GGCGGTGCGG
CGGGTGCAGT CCCCCGCGGT GCGAGCCCTG GGCCTGATTT ACCCCGTGGC GCAGCACCCG
GACGAGCCCA GTCCGTCGTA CCAGGAAAAT GAAGGCAAGT TCCTCACCAA GGGGGTCATG
CAGTGGTTCA CCGCCAGCTA TCTGGGCGGG CCATCACCCA CGCCGCCGGA TCATCCCGAT
GTGGCGCTGC TGAAGTCCGA GCTGGCGGCG CTGCCCGCCA CCTGGGTCGC CACCATGGGC
CATGACCCGC TGCGTGACGA AGGCCATGCG CTGGCCCTGC GTGCCGAGGC CGCAGGCGTT
TTGGTCGCGC ACCAGCACTA CCCCAGCGCC ATCCACGCCT GCATCCATTT CAGCGCCGTG
TCCCCCATTG GCCCGCAGGT GCTGGCGGAC TTGGCGCAGT GGTTGCGCGA GCAGGCTTGA
|
|---|
| Protein sequence | MTTSPVRTTL DATPLDPAFA GFLAQAAAQG APPLEALPPP IARQVYRDLA NALGLPAPAI
GKVEDKSIPG PGGVLPLRAY SPTTQGPWPV LLYVHGGGFV MGDLQTHDEV CRTLCHLTGM
LVVAVDYRLA PEHPFPAAPD DAEAALRWIC VHADTLGGDP HRIAVAGDSA GAQLALVAVR
RVQSPAVRAL GLIYPVAQHP DEPSPSYQEN EGKFLTKGVM QWFTASYLGG PSPTPPDHPD
VALLKSELAA LPATWVATMG HDPLRDEGHA LALRAEAAGV LVAHQHYPSA IHACIHFSAV
SPIGPQVLAD LAQWLREQA
|
|---|
| |