| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_0130 |
|---|
| Symbol | |
|---|
| ID | 4012330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 133577 |
|---|
| End bp | 135250 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637939814 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_546993 |
|---|
| Protein GI | 91786041 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.842605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAA AAATCACCCC CTTCCAACTC GGCGCCCTGG CGCTGGCGAG CAGCCTGCTC
TGCGCGCTGT CGGCCCAGGC CATGGAGTTG GGTTCCAACC CCGACACCAG GATACGGTTG
GACTTCACGC CAAAGTACAG CACGGCTTAT CGGCTGAAGG ATGCTTCGGC GGCCCTGACG
GTGCCGTCGC CCGATGCCGG CGTGGCCAAT GAGAACGACG GCAATGCCAA TTTCAGTAAA
AAAGGCATCG TCTCCAACCG CATCGATTTG CTGACCGAGT TCGATGTGAC CCACGGCAAC
TTCGGTCTGC GCATCAGCCA TTCCGCCTGG TATGACTCGA AGTACCGGGG CACCAATGCG
AACGACGGCA CACTGGGGGT CAGCAACTTC GTCGGCCAGC CCGCCAACCA GTTCATTCCA
GCGACCAGCG CCCAGCATGG CCGCGATGAC GAGTTTCTCG ATGCCTTTGC GTTTGCCAAG
GGCAACCTGG GCAGCATGCC GGCTTCGATC CGCGTCGGCA AGCATGCCTT GCAATACGGC
GAAAGCCTGT TCTTCGGCCA GAACGGCATT GCCAATGCGC AAGGCCCGGT GGACATCGCC
AAGATCGTCT CGGTGCCCAA CTGGCAGTTC AAGGAAGTTC TGCTGCCGGT GGAGCAGATT
TCCGGCTCGC TGCAGGTGGC GGAGGGGGTG ACCCTGGGCG GCTACTACCA GCTCAAATGG
CGGCCCAGCA AGATCCCTGG TGTGGGCAGT TATTTCTCGA ATCAGGACTA CATCGGCGGC
GGCCGGGTCT ACCTGGGGCC GACCACGGTG CTCAACACCG ACAACAGCAA GGACCAGACG
CCGGGCAACA GCGGTCAGTT CGGAGCCCAA CTGCGCTGGT CGCCTGCAGG CAGCGCGTTT
GAATACGGCC TCTACGCCGC GCGCTATAAC GACAAAACGC CATCGGTACC GGTGTTCGAC
CTGATCAATG GCAACGTCCA CAAGGTTTAT GCCAAGGGCA TCAAGACCTT TGGCGCCAGC
GTCACGTCGT CCGTGGGGCA GCTCAACTGG GCGCTGGAAG GCTCGGTGCG CACCGACGCA
CCGCTGGCCA GCGACCCGGC TGTGTTGGGC GGTGCGCCCT TCATGCCGCC GGCCAACTGT
GACGGATCGG CCAGCAACCC CTGCCACGCC ATCGGCAAGA CGGCGCACCT GAACCTGTCG
GGCATCTATG TGCTCACCAA GTCCAGCCTG TGGGACGGCG GCGCCCTTTT GGCCGAGCTG
GCCTGGAACC GGGTCTTGAG CGTGACCAGG AACCCCAGCG CCGTTGGCTT CGGCGGGCTT
GATCCCAACA CCACGCGCGA TGCCGCGGCC TTTCGCATGA TTTTCGAGCC GCAGTACTTC
CAGGTACTGC CCGGCCTGGA CCTGTCGATT CCGATCGGCC TGGGCTACAA CTTTGGGGGC
CGCTCCTCGG CCATCTTCAA CTTCGCCGGC GGTGTCAGCA AAGGGGGCGA CTTCAGCGTC
GGCGTCAAGG GCAAGTACCA GGAATGGAAT GTGGGCCTGA ACTACACCGC TTTCTTCGGC
AAGGAGAACA CTTTCACCGT CACCGATGCG CGTACACCCA CCCGCATGCT GTCCTACGGC
CAGACGCTGA AAGACCGCAG TTACCTGTCC TTTACGGCTT CCCGCACTTT CTGA
|
|---|
| Protein sequence | MTKKITPFQL GALALASSLL CALSAQAMEL GSNPDTRIRL DFTPKYSTAY RLKDASAALT
VPSPDAGVAN ENDGNANFSK KGIVSNRIDL LTEFDVTHGN FGLRISHSAW YDSKYRGTNA
NDGTLGVSNF VGQPANQFIP ATSAQHGRDD EFLDAFAFAK GNLGSMPASI RVGKHALQYG
ESLFFGQNGI ANAQGPVDIA KIVSVPNWQF KEVLLPVEQI SGSLQVAEGV TLGGYYQLKW
RPSKIPGVGS YFSNQDYIGG GRVYLGPTTV LNTDNSKDQT PGNSGQFGAQ LRWSPAGSAF
EYGLYAARYN DKTPSVPVFD LINGNVHKVY AKGIKTFGAS VTSSVGQLNW ALEGSVRTDA
PLASDPAVLG GAPFMPPANC DGSASNPCHA IGKTAHLNLS GIYVLTKSSL WDGGALLAEL
AWNRVLSVTR NPSAVGFGGL DPNTTRDAAA FRMIFEPQYF QVLPGLDLSI PIGLGYNFGG
RSSAIFNFAG GVSKGGDFSV GVKGKYQEWN VGLNYTAFFG KENTFTVTDA RTPTRMLSYG
QTLKDRSYLS FTASRTF
|
|---|
| |