Gene Bpro_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0094 
Symbol 
ID4012255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp98341 
End bp99714 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content72% 
IMG OID637939780 
Producttype III effector Hrp-dependent outers 
Protein accessionYP_546959 
Protein GI91786007 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGACA ACCGCTGGCC GGACGGCCTG CTGCTCGCCT ACTACGGCGA CGACTTCACC 
GGCTCCACCG ACGTGATGGA GGCCTTCAGC GCGGCTGGCG TGCCGACCGT GCTGTTCCTG
CGCCCGCCCA CGGCAGACTG GCTGAAGCGG TTTCCCGAGG TGCGCTGCGT CGGCCTGGCC
GGCCAGTCGC GCGGCCGCAG CCCGGACTGG ATGGACCGCG AGTTGCCGCA GGCCTTCGCC
AGCCTGGCCA AACTCGGCGC GCCGATTCTG CAATACAAGG TCTGCTCGAC CTTCGACTCC
TCGCCCGCGG TGGGTTCGAT CGGCCGCGCC ATCGATATCG GCGTGCCGCT GATGCCGGGC
AACTGGTCGC CCATGGTGGT CGGCGCGCCG CGCCTGAAGC GCTACCAGGC CTTTGGCAAC
CTGTTCGCGG CGGTCGACGG CGTGGGCTAC CGCCTGGACC GGCACCCGAC CATGTCGCGC
CACCCGGTCA CGCCCATGGC CGAGGCTGAC CTGCGCCTGC ATCTGGCGGC GCAGACACCG
CGCCGCAGCG AGCTGATCGA CATGGTGCAG CTGCGTACCG GCGACGCGGC CGCCCGCGTG
CAGGCGCTCG CCGGTGCCGA CGTGCCGGTG GTGCTGCTTG ACGTGCTTGA CGAAGAAACA
CTGGCTGCGG CCGGCCGCCT GGTCTGGACG CAGCGCGGCC GTGGCCTGTT CACGGCCTCG
TCATCCGGCC TGCAGTACGC GCTGGCCGCG CACTGGCGCA GCCAGGGCCT GTTGCCGGAG
CAGCCTTCGC TGCCGGTGGC GGCACCCGTG CCGGTGATTG CCGTGGTCAG CGGCAGTTGC
TCGCCGGTGA CGGCGGCGCA GATCGCCTGG GCGCAAGGGC AGGGCTTTCA GGCCGAGCGC
CTGAATCTGC CGCGCCTGCT CGACGCACGC GAGAGCGAGG TCGAGATAGA GCGCGTGGTG
GCCGCCGCCG TGGGGGCCAT AGCGCTGGGC GTCAGCCCGC TCGTGTATTC AGCCGCCGGG
CCCGACGACG CAGCGGTGCG CCAGTTCGAT GCGACGGCCA CGCAAGCCGG CCTGGCCCGC
GGCGAGGCGG CGCAGCGCGT CGGTGAGGGT CTTGCCGAAG TGATGCGGCG GCTGCTCGAG
CGTGCGCCCT TGCAGCGCAT TGTGGTGGCT GGTGGCGACA GTTCGGGCGA GGTGGCGAGC
GCGCTCGACA TCACCGCGCT CAGCGTGGTG GCCGGGCTCG CGCCGGGCGC ACCGCTGTGC
AAGGCCTGGT CCGAGCGCCG CGAACGCGAC GGCCTGGAGA TTGTGCTGAA GGGCGGCCAG
ATGGGCACGG CCTCGTTTTT CGGCGCCGTG CGTGCCGGCC GTTTGCTCGA CTAA
 
Protein sequence
MADNRWPDGL LLAYYGDDFT GSTDVMEAFS AAGVPTVLFL RPPTADWLKR FPEVRCVGLA 
GQSRGRSPDW MDRELPQAFA SLAKLGAPIL QYKVCSTFDS SPAVGSIGRA IDIGVPLMPG
NWSPMVVGAP RLKRYQAFGN LFAAVDGVGY RLDRHPTMSR HPVTPMAEAD LRLHLAAQTP
RRSELIDMVQ LRTGDAAARV QALAGADVPV VLLDVLDEET LAAAGRLVWT QRGRGLFTAS
SSGLQYALAA HWRSQGLLPE QPSLPVAAPV PVIAVVSGSC SPVTAAQIAW AQGQGFQAER
LNLPRLLDAR ESEVEIERVV AAAVGAIALG VSPLVYSAAG PDDAAVRQFD ATATQAGLAR
GEAAQRVGEG LAEVMRRLLE RAPLQRIVVA GGDSSGEVAS ALDITALSVV AGLAPGAPLC
KAWSERRERD GLEIVLKGGQ MGTASFFGAV RAGRLLD