Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0089 |
Symbol | |
ID | 4012250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 92760 |
End bp | 93326 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637939775 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_546954 |
Protein GI | 91786002 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCTC CGTCAGCTCC TGGCCTGGCG ATGCCTCTGG CAAGCCAGGG CCGGGCGGCC GGCATCACCG CGGCCCTGCG GGCGGGTGTG CTCGCCCTCG ACCGGCGGAC CACCGAGTTG GCGCTGCATG TCGGCTGCCT GCTGCTGGCC GTGATCTGCG GCCTCGGGAT GTGGCAGGTG GTCACGCGGT TTGTGCTGTC GCAACCATCC ACCTGGACCG AGGAGGCAAT GCGGCGCCTG CTGATCTGGT GCGTGATGCT GGGGGTGGTG GTGGCATTTC GCCGCGGCGC GCTGGTGTCG GTGGACCTGA TGCTGCGCGT ATCGCGCGGC TGGTGGCGCC ACACCGTGCG CAGCCTGATC ACGCTGGCCT CGCTGGCCTT TCTCGCCACG CTGTTGTGGT TCGGCATCGA ACTCACGTGG CGGGTGCGCT TCCAGACCTT TGCCAGCATG GAGCTGTCGA TGGCCTGGGC CTATGCCGCG CTGCCTGTGG GCGCCGCCCT GAGCGTGCTG GCCGTGCTCG CGCAGCACAT CGATCCGATG AACGAAGAAC TCGAGAACGC CCAGTAG
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Protein sequence | MTPPSAPGLA MPLASQGRAA GITAALRAGV LALDRRTTEL ALHVGCLLLA VICGLGMWQV VTRFVLSQPS TWTEEAMRRL LIWCVMLGVV VAFRRGALVS VDLMLRVSRG WWRHTVRSLI TLASLAFLAT LLWFGIELTW RVRFQTFASM ELSMAWAYAA LPVGAALSVL AVLAQHIDPM NEELENAQ
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