Gene Bpro_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0089 
Symbol 
ID4012250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp92760 
End bp93326 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content69% 
IMG OID637939775 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_546954 
Protein GI91786002 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTC CGTCAGCTCC TGGCCTGGCG ATGCCTCTGG CAAGCCAGGG CCGGGCGGCC 
GGCATCACCG CGGCCCTGCG GGCGGGTGTG CTCGCCCTCG ACCGGCGGAC CACCGAGTTG
GCGCTGCATG TCGGCTGCCT GCTGCTGGCC GTGATCTGCG GCCTCGGGAT GTGGCAGGTG
GTCACGCGGT TTGTGCTGTC GCAACCATCC ACCTGGACCG AGGAGGCAAT GCGGCGCCTG
CTGATCTGGT GCGTGATGCT GGGGGTGGTG GTGGCATTTC GCCGCGGCGC GCTGGTGTCG
GTGGACCTGA TGCTGCGCGT ATCGCGCGGC TGGTGGCGCC ACACCGTGCG CAGCCTGATC
ACGCTGGCCT CGCTGGCCTT TCTCGCCACG CTGTTGTGGT TCGGCATCGA ACTCACGTGG
CGGGTGCGCT TCCAGACCTT TGCCAGCATG GAGCTGTCGA TGGCCTGGGC CTATGCCGCG
CTGCCTGTGG GCGCCGCCCT GAGCGTGCTG GCCGTGCTCG CGCAGCACAT CGATCCGATG
AACGAAGAAC TCGAGAACGC CCAGTAG
 
Protein sequence
MTPPSAPGLA MPLASQGRAA GITAALRAGV LALDRRTTEL ALHVGCLLLA VICGLGMWQV 
VTRFVLSQPS TWTEEAMRRL LIWCVMLGVV VAFRRGALVS VDLMLRVSRG WWRHTVRSLI
TLASLAFLAT LLWFGIELTW RVRFQTFASM ELSMAWAYAA LPVGAALSVL AVLAQHIDPM
NEELENAQ