Gene Bpro_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0087 
Symbol 
ID4012248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp90837 
End bp91667 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID637939773 
Producthypothetical protein 
Protein accessionYP_546952 
Protein GI91786000 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAA CAATCGCGCT GTTTGGCGCG GGCGGAAAAA TGGGGGTTCG GCTGGCCAGG 
AACCTGCAGG GCTCGGACTA CCGGGTGCGC CATGTCGAGG TCGGCGCCGT TGGCCGGCAG
CGCCTGAAGG ACGAACTGGG CGTCGACTGC GTGTCAGTGG ATGCCGCGCT GGACGGCGCC
GGGGTGGTGA TCCTGGCTGT TCCCGACACC CTGATCGGCA AGGTCGCCGC CGAGATTTCG
CCGAAGCTGC AGCCTGGCAC CATGGTGATC ACGCTGGACG CCGCCGCGCC CTTTGCCGGC
CACCTGCCGG ACCGGCCGGA CCTGGTCTAC TTCGTCGCCC ATCCCTGCCA CCCGCCCATC
TTCAATGACG AAAGCACGAG CGAAGCGCGG CGCGACTTCT TTGGCGGCGC GCATGCCAAG
CAGTCCATCG TCAGCGCCCT GATGCAGGGC ACGGACGCAG ACTTTGAATT GGGCGAGGCG
GTGGCCAAGG TGATTTACCA GCCCATCCTG CGCTCCTATC GCCTCACGGT AGAGCAGATG
GCTTTGCTGG AGCCCGGCCT GTCCGAAACC GTCTGCGCCA CGCTGCTCGA CGTGATGCGC
GAAGCGATGG ACGAGGTGGT GGCGCGTGGC GTGCCCAAGG ACGCTGCCCG CGACTTCCTG
CTGGGCCACA TGACCATTCT GGGTGCGGTG ATCTTCAAGG AGATCCCGGG CCAGTTTTCC
GATGCCTGCA ACAAGGCGAT TGCCTTCGGC AAGCCGCGCC TGATGCGCGA CGACTGGAAA
AAAGTCTTCG ACCACGACGA GATCGCCGAC AGCATCCGCC GCATCACCTG A
 
Protein sequence
MKTTIALFGA GGKMGVRLAR NLQGSDYRVR HVEVGAVGRQ RLKDELGVDC VSVDAALDGA 
GVVILAVPDT LIGKVAAEIS PKLQPGTMVI TLDAAAPFAG HLPDRPDLVY FVAHPCHPPI
FNDESTSEAR RDFFGGAHAK QSIVSALMQG TDADFELGEA VAKVIYQPIL RSYRLTVEQM
ALLEPGLSET VCATLLDVMR EAMDEVVARG VPKDAARDFL LGHMTILGAV IFKEIPGQFS
DACNKAIAFG KPRLMRDDWK KVFDHDEIAD SIRRIT