Gene Bpro_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0060 
Symbol 
ID4011062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp62631 
End bp63506 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content67% 
IMG OID637939746 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_546925 
Protein GI91785973 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCG CTATTGAAAC AATTCCGCCC GCCGCCGTTC CGGCGCGCCT GGTGCCGCGC 
CTGTCGCGCT GGTCGCGCAC CGGCCTGCTG GGCCTGGCGG TGCTGGTCTT CTGGCTGTTT
ATTGCGGCCG CAGGGCCGTG GATACTGCCG CACGGCTCGG GCGACATGAG CACGGCAGGC
GTTTTTGACG CGATCAGCCG GACCCATTGG CTGGGCACCG ATTACCTGGG CCGCGACATC
CTGAGCCGCG TCATGGACGG CGCGCGCTAC ACCGTCGGCG TGGCGCTGGC CGCCACCGTG
ATGGCCTGCG CTGCGGGCAC GCTGCTGGGC CTGCTGGCTG CCGTCAACGG CGGCTGGTTT
GACGCCGTGT TGAGCCGGCT GCTGGATACG CTGGTGTCGA TCCCGAGCAA GATGCTGGCG
CTGATCATTG TGGCGGCTTT CGGCTCCTCG ATACCGCTGT TGATAGTCAC GGTGGCGGTG
GTCTACACGC CGGGCGCTTA CCGCATCGCA CGCGCGCTGG CGGTCAATAT CAACGCCATG
GACTATGTGA CCGTGGCGCG CGCGCGCGGC GAGGGCCGCA CCTACATCAT GCTGCGCGAA
GTGCTGCCCA ACATTGCCGG CCCCTTGCTG GCCGATATGG GCCTGCGTTT TGTGTATGCC
GTGCTGTTGC TGGCGAGCCT GAGTTTTCTT GGCCTGGGCG TGCAACCGCC GGTGGCCGAC
TGGGGTTCGC TGGTGCGTGA AAACATCGGT GCCCTGCCGA CCGGCGGCGC AGCGGTGATT
GCGCCGGCGC TGGCGATTGC CACGCTCACG ATTGCCGTGA ACCTGGTCAT AGACAACCTG
CCCGGCCGGG CCCAAGCCAA CCAGGAGAGC CGCTGA
 
Protein sequence
MSSAIETIPP AAVPARLVPR LSRWSRTGLL GLAVLVFWLF IAAAGPWILP HGSGDMSTAG 
VFDAISRTHW LGTDYLGRDI LSRVMDGARY TVGVALAATV MACAAGTLLG LLAAVNGGWF
DAVLSRLLDT LVSIPSKMLA LIIVAAFGSS IPLLIVTVAV VYTPGAYRIA RALAVNINAM
DYVTVARARG EGRTYIMLRE VLPNIAGPLL ADMGLRFVYA VLLLASLSFL GLGVQPPVAD
WGSLVRENIG ALPTGGAAVI APALAIATLT IAVNLVIDNL PGRAQANQES R