Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0060 |
Symbol | |
ID | 4011062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 62631 |
End bp | 63506 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637939746 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_546925 |
Protein GI | 91785973 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCCG CTATTGAAAC AATTCCGCCC GCCGCCGTTC CGGCGCGCCT GGTGCCGCGC CTGTCGCGCT GGTCGCGCAC CGGCCTGCTG GGCCTGGCGG TGCTGGTCTT CTGGCTGTTT ATTGCGGCCG CAGGGCCGTG GATACTGCCG CACGGCTCGG GCGACATGAG CACGGCAGGC GTTTTTGACG CGATCAGCCG GACCCATTGG CTGGGCACCG ATTACCTGGG CCGCGACATC CTGAGCCGCG TCATGGACGG CGCGCGCTAC ACCGTCGGCG TGGCGCTGGC CGCCACCGTG ATGGCCTGCG CTGCGGGCAC GCTGCTGGGC CTGCTGGCTG CCGTCAACGG CGGCTGGTTT GACGCCGTGT TGAGCCGGCT GCTGGATACG CTGGTGTCGA TCCCGAGCAA GATGCTGGCG CTGATCATTG TGGCGGCTTT CGGCTCCTCG ATACCGCTGT TGATAGTCAC GGTGGCGGTG GTCTACACGC CGGGCGCTTA CCGCATCGCA CGCGCGCTGG CGGTCAATAT CAACGCCATG GACTATGTGA CCGTGGCGCG CGCGCGCGGC GAGGGCCGCA CCTACATCAT GCTGCGCGAA GTGCTGCCCA ACATTGCCGG CCCCTTGCTG GCCGATATGG GCCTGCGTTT TGTGTATGCC GTGCTGTTGC TGGCGAGCCT GAGTTTTCTT GGCCTGGGCG TGCAACCGCC GGTGGCCGAC TGGGGTTCGC TGGTGCGTGA AAACATCGGT GCCCTGCCGA CCGGCGGCGC AGCGGTGATT GCGCCGGCGC TGGCGATTGC CACGCTCACG ATTGCCGTGA ACCTGGTCAT AGACAACCTG CCCGGCCGGG CCCAAGCCAA CCAGGAGAGC CGCTGA
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Protein sequence | MSSAIETIPP AAVPARLVPR LSRWSRTGLL GLAVLVFWLF IAAAGPWILP HGSGDMSTAG VFDAISRTHW LGTDYLGRDI LSRVMDGARY TVGVALAATV MACAAGTLLG LLAAVNGGWF DAVLSRLLDT LVSIPSKMLA LIIVAAFGSS IPLLIVTVAV VYTPGAYRIA RALAVNINAM DYVTVARARG EGRTYIMLRE VLPNIAGPLL ADMGLRFVYA VLLLASLSFL GLGVQPPVAD WGSLVRENIG ALPTGGAAVI APALAIATLT IAVNLVIDNL PGRAQANQES R
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