Gene Bpro_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0058 
Symbol 
ID4011060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp59868 
End bp61487 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content63% 
IMG OID637939744 
Productextracellular solute-binding protein 
Protein accessionYP_546923 
Protein GI91785971 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.112335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAA GCAAGAAACT GCAAGCCTTG ATCGGCCCCC AGGAAAGCAT GCGCGTGATG 
AACGCGATGC AGGCAGGCGC CAAGCGGCGC GATGTGCTCG CCATGCTCAT GGCAGGCGGC
ATGCAGGCCA CGCTGGCCGG CAGCCTGGCG GGCATTGCCG GCGCCGCCCA TGCGCAGACG
CCGCGCCGTG GCGGACGGAT CCGGGTGGCC GGCGCCACCG CTGCAATCAA TGACACGCTG
GATCCGGCCA AGCAGTCCAA CCAGAGCGAC TACATCCGCG GCAGCATGTT CTACAACGGC
CTCACGGTGC TGGATGGCAG CCTCACGCCG CGCCCCGCGC TGGCCGAAGA GTTCACCACC
AGGGATGCGA CCACCTGGGT CTTCAAGCTG CGCAAGGGCG TGGTCTTTCA TGACGGCAAG
CCGCTGGTCC CAGCCGACGT GGTGTTCTCG CTGATGCGCC ACAAGGACCC GGCCACTGCC
TCCAAGGCCA AGGCTCTGGC CGACCAGATC GACGACGTGA AGGCCAGCGG CCCTAACGAA
GTGACGATCA AGCTCAAGGC GCCCAACGCC GACTTGCCGG TGATCCTGGG CACCTTCCAC
TTCCATATCG TCAAGGACGG CACCACCGAC TTCAATGCCG GCATCGGCAC CGGCCCTTAC
AAGGTCAAGG AATTCAAGCC TGGCGTGCGC TCGATCGCGG TGCGCAACGA GGCCTATTGG
AAGCCGGGCC GCCCTTACCT CGATGAGATT GAATATGTGG GCATCGGCGA TGAAGGCGCG
CGTGTCAATG CGCTGCTGTC GGGCGACCTG GACCTGGTGG GCTCGGTCAA TCCACGTTCG
GTGCAGCGTG TGCGCGACTC CGCCGGCCAT GCGATCTTTG AGACGCAGTC GGGCGGGTAC
ACCGACCTGG TGATGCGCCG CGACGGTGGT CCGGGCTCCA ACCCCGACTT CGTGATGGCC
ATGAAATACA TGTTTGACCG CGAGCAGATG AAGCGTTCCA TTGCGCTGGG CCATGCGGTC
GTTGCCAACG ACCAGCCTAT CGATCCGACC AACCGCTTTT ATTTTGCCGG CCTGCCGCAG
CGCGCCTTCG ATCTGGACAA GGCCAAGTTC CACTTGCAAA AAGCCAATCT GGGCAGCGCC
CCGATTCCGG TTGTGGCCTC GCCCGCAGCG CTGTATTCTG TCGAGATGGC ATTGGTGATG
CAGCAGACGG CGCAGAAACT GGGCTTGAAC CTGGACGTCA AACGCATGCC CGCCGATGGC
TACTGGTCGA ATCACTGGAT GAAAAGCCCG GTCGGTTTCG GCAACGTCAA TCCGCGCCCC
AGCGCCGACA CGCTGTTCAC GCAGTTCTTC AAGTCGGATG CGGCCTGGAA CGAGTCGGGC
TGGAAAAGCG AGAAGTTCGA CCAGCTGCTG GTTGCCGCGC GCGCCGAAAC CGACGACACC
AAGCGCCGCA AGATGTACGC CGACATGCAG GTGCTGGTGC ACGAGCAGGG CGGCATCGGC
ATTCCGCTGT TCCTGGCCAG CATTGACGGC CACTCGAAGA AACTCAAGGG CTTGTCGCCG
ATCCCGGTCG GCGGCCTGAT GGGCTACGCC TTCGCTGAAC ACGTCTGGCT GGAAGCATGA
 
Protein sequence
MNESKKLQAL IGPQESMRVM NAMQAGAKRR DVLAMLMAGG MQATLAGSLA GIAGAAHAQT 
PRRGGRIRVA GATAAINDTL DPAKQSNQSD YIRGSMFYNG LTVLDGSLTP RPALAEEFTT
RDATTWVFKL RKGVVFHDGK PLVPADVVFS LMRHKDPATA SKAKALADQI DDVKASGPNE
VTIKLKAPNA DLPVILGTFH FHIVKDGTTD FNAGIGTGPY KVKEFKPGVR SIAVRNEAYW
KPGRPYLDEI EYVGIGDEGA RVNALLSGDL DLVGSVNPRS VQRVRDSAGH AIFETQSGGY
TDLVMRRDGG PGSNPDFVMA MKYMFDREQM KRSIALGHAV VANDQPIDPT NRFYFAGLPQ
RAFDLDKAKF HLQKANLGSA PIPVVASPAA LYSVEMALVM QQTAQKLGLN LDVKRMPADG
YWSNHWMKSP VGFGNVNPRP SADTLFTQFF KSDAAWNESG WKSEKFDQLL VAARAETDDT
KRRKMYADMQ VLVHEQGGIG IPLFLASIDG HSKKLKGLSP IPVGGLMGYA FAEHVWLEA