Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0041 |
Symbol | |
ID | 4011760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 44115 |
End bp | 44762 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637939727 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_546906 |
Protein GI | 91785954 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAG ACGCTTTTGC TCCATTGACC GGCCCCATCG GCTTTTACCC CGTGGTGCCC GATGCCGCCT GGGTGCAGCG TCTGCTGGGC TGGGGTGTGC GTACCATCCA GCTGCGCATC AAGGCGGCGG ACCACACGCC GGCCGAGATC GAGCGCGAAG TGCGCGCGGC GGTCGAGGCC GGGCGCGCCG TGCCGGGCGC GCAGGTCTTC ATCAACGACC ACTGGCAGCT GGCGCTGGCC GCCGGCGCCT ATGGCGTGCA CCTGGGCCAG GAAGACCTGA GCATGGCGGA GGCGGACCTC AATGCCCTGC GCAAGGCGGG TGTGCGGCTG GGCCTGAGCA CGCACACGCC GGCCGAGCTG GCGCGTGCCC ATGCGGTGCA GCCCTCCTAC CTGGCGATCG GTCCGGTCTA CCCGACCCTG CTCAAGGTCA TGCCCTACGA GCCGGTGGGC CTGGAGCGCC TCAAGGAATG GGCGCTGCGG GCCGTACCGT ATTCCGTGGT GGCGATAGGC GGCATTTCGC TGGCACGCTT GCCTGGCGTG ATAGCCTGCG GCGTGGATGG CGTGGCGGTG GTCAGCGCGG TGACGCAGGC GGCTGACCCC GAGCAGGCCA CCAGGCAGGC ACTCGCCCTC TTTGACGCGC CCGCTTGA
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Protein sequence | MNTDAFAPLT GPIGFYPVVP DAAWVQRLLG WGVRTIQLRI KAADHTPAEI EREVRAAVEA GRAVPGAQVF INDHWQLALA AGAYGVHLGQ EDLSMAEADL NALRKAGVRL GLSTHTPAEL ARAHAVQPSY LAIGPVYPTL LKVMPYEPVG LERLKEWALR AVPYSVVAIG GISLARLPGV IACGVDGVAV VSAVTQAADP EQATRQALAL FDAPA
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