Gene Bpro_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0038 
Symbol 
ID4011757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp41740 
End bp42801 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID637939724 
ProductFAD dependent oxidoreductase 
Protein accessionYP_546903 
Protein GI91785951 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID[TIGR02352] glycine oxidase ThiO 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC CTCACATCGG TATCGCAGGC GCAGGCCTGG CCGGCCGCAC GCTGGCCTGG 
CGCCTGTTGC GCGCCGGCTG CCGCGTGAGC CTGTTCGACG CGCGCCTGCG CGATGACCAG
GCCACCGCGT CCATGACGGC GGCGGCCATG CTCTCTCCGC TGGCCGAGCT GGCGGTGTCG
GACGAGGTGG TGTTTGCGCT GGGCCAGCGC TCCATGCAGC TGTGGCCGCG CTGGATCGCG
GAGCTGGCGG CCACGGGCGC ACCGCCGGTG TATTTCCGCC AGCAGGGCAC GCTGGTGGTG
GCGCACGCAC CCGACCAGGC CTCGCTGGAA CACTTCACGC GCCTGCTGCA TCACAAGCTG
CCCGAGGCCT GCCGCGCGCA GGTGCACACG CTCGACAGTG CGTCGCTCGC GCAGTACGAG
CCGGCGCTGG CCGGGCGTTT TGGCGGCGGC CTGTTTCTGG AAAGCGAGGG CCAGCTGGCC
AATGACCAGC TGATGGCGGC GCTGGCGGCG CAGATCGATG CGCTGGGCTG CCACTGGCAT
GAAGGGCAGC GGGTGGACCG CCTGGCGCCG CATTTCATCA GCTGCGCCGG CGCCAACTAC
ACCGTCGATG TGGCGGTGGA TGCCCGCGGC GTGGGCAGCC AGGCGGCATG GCCGCAATTG
CGCGGCGTGC GTGGCGAGGT GCTCACGGTG GAATGCCCGG GCGTGACGCT GCAGCGCCCG
GTGCGCCTGA TGCATCCGCG CTACCAGCTT TATGTGGCAC CGCGCCCCGA TCACCGTTTT
GTGGTGGGCG CGACCGAGCT GGAGTCGGAA GACACCGGCG CCATGACCTT GCGCTCCATG
CTGGAACTGG GCAGCGCCCT GCACAGCCTG CACCCGGCCT TTGGCGAGGC GCGTGTGGTG
CGGCTGGCGG CGGCATTGCG GCCGGCTCTG GACGACCATC GCCCGGCGGT GGCCTTGCGC
GACGGTGTCT GGCATATCAA CGGCCTGTAC CGGCATGGCT ATCTGTGTGC GCCTGCGCTG
GTGGAGGAAC TGGTCCATCA ACTGCTGGAG AGCCCGGCAT GA
 
Protein sequence
MSTPHIGIAG AGLAGRTLAW RLLRAGCRVS LFDARLRDDQ ATASMTAAAM LSPLAELAVS 
DEVVFALGQR SMQLWPRWIA ELAATGAPPV YFRQQGTLVV AHAPDQASLE HFTRLLHHKL
PEACRAQVHT LDSASLAQYE PALAGRFGGG LFLESEGQLA NDQLMAALAA QIDALGCHWH
EGQRVDRLAP HFISCAGANY TVDVAVDARG VGSQAAWPQL RGVRGEVLTV ECPGVTLQRP
VRLMHPRYQL YVAPRPDHRF VVGATELESE DTGAMTLRSM LELGSALHSL HPAFGEARVV
RLAAALRPAL DDHRPAVALR DGVWHINGLY RHGYLCAPAL VEELVHQLLE SPA