Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0037 |
Symbol | |
ID | 4011756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 39663 |
End bp | 41579 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637939723 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_546902 |
Protein GI | 91785950 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAA CCCGCCTCAC CGTTGACACC AACGACCTCG CAAGCCGTAT CACGCGCGCG CCTTTTCCCG GTTCCGCCAA AATTTATATC GAGGGTTCGC GCCCCGACAT CCGCGTGCCG TTTCGCGAGG TCACGCTGAC CGACACGATG GTGCACGAGG GGGCGGGCGA GCCGCGCCGC GAAGCCAATC CGCCGCTGCG CCTGTATGAC GCCTCGGGCG TCTACACCGA CCCGGCGTCG CCGATCGACA TCACGCGCGG CTTGCCGCCT TTGCGCGGCG CCTGGATCAA TGAGCGCGCC GACACCGAAG CGCTGCCCGG CATCAGCAGC GCCTATGGCC GCGAGCGCCT GAACGACCCG GCGCTGGCCG CCCTGCGCAT GGCGCATGCG CCCGTGCCGC GCCGCGCCAA GGCCGGTGCC AACGTCTCGC AAATGCATTA CGCCCGCAAA GGCATCATCA CGCCGGAGAT GGAATACATC GCGGTGCGCG AAAACCTGGT GCGCGCGCAG CTGGCCGAGC GCCTGGCGAC CGAGCGCATG CCGAAGAAAG GGCACTCCTT CAACGCCTCG ATTCCGGAAC AGATCACCGC TGAATTTGTG CGTGATGAAG TGGCGCGCGG CCGCGCCGTG ATTCCGAACA ACATCAACCA CCCCGAGAGC GAGCCGATGA TCATCGGCCG CAATTTCCTG ATCAAGGTCA ATGCCAACAT CGGCAACTCG GCCGTGACGT CTTCCATCGA GGAAGAGGTG GACAAGCTGG TCTGGTCGAT CCGCTGGGGC GCCGACACCG TGATGGACCT GTCGACCGGC GAGAACATCC ACGAGACGCG CGAATGGATT CTGCGCAACT CGCCGGTGCC GATCGGCACG GTGCCGATTT ACCAGGCGCT GGAAAAAGTC AACGGCAAGG CCGAAGACCT GACCTGGGAA ATCTTCCGCG ACACGCTGAT CGAGCAGGCC GAGCAGGGCG TGGACTACTT CACCATCCAC GCCGGTGTGC GCCTGGCCTA TGTGCCGCTG ACCGCCAACC GCCTGACGGG CATCGTCTCG CGCGGCGGCT CCATCATGGC CAAGTGGTGT TTGTCGCACC ACAAGGAAAG CTTTTTGTAC GAGCGCTTTG ACGAGATCTG CGAGATCATG AAGGCCTACG ACGTGTGCTT CTCGCTGGGC GACGGTCTGC GGCCCGGCTC GATTGCCGAT GCCAATGACG AAGCGCAGTT TGCCGAGCTG CACACGCTGG GCGAACTCAC GCAGATCGCC TGGAAACATG ATGTGCAGGT GATGATCGAA GGCCCTGGCC ATGTGCCGCT GCAGCTGGTG AAGGAAAACG TCGACAAGCA GCTCGAGGCT TGTTTTGAGG CGCCGTTCTA CACGCTGGGC CCGCTGATCA CCGACATCTC GCCGGGCTAC GACCATATTT CTTCCGCGAT GGGCGCGGCC AACATCGGCT GGTATGGCAC AGCCATGCTC TGCTACGTGA CGCCGAAGGA GCACCTCGGG CTGCCAAACC GCGACGACGT GAAGCAGGGC CTGATCGCCT ACAAGATTGC GGCCCACGCG GGCGACCTGG CCAAGGGCTA CCCGGGCGCG CAGATGTGGG ACAACGCGGT GTCCAAGGCG CGCTTCGAGT TCCGCTGGGA AGACCAGTTC CGCCTGGCGA TCGACCCGGA CACGGCCATG GCCTACCACG ACGAAACCCT GCCGAAGGAA AACGCCAAGG TGGCGCATTT CTGTTCGATG TGCGGACCGA AGTTCTGTTC GATGAAGATC TCGCAGGAAG TGCGCGAGTT TGCAAGGCTC AATCCGGCCA GCACCACGCT GGCCGCGCCG GGCGTGATTG CGATCAAGCA GATCGACAGC GGATTCGAGG AAAAGGCGAA AGAGTTTCGT GAAGGTGGCA GTGAGATTTA TTCTTGA
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Protein sequence | MAKTRLTVDT NDLASRITRA PFPGSAKIYI EGSRPDIRVP FREVTLTDTM VHEGAGEPRR EANPPLRLYD ASGVYTDPAS PIDITRGLPP LRGAWINERA DTEALPGISS AYGRERLNDP ALAALRMAHA PVPRRAKAGA NVSQMHYARK GIITPEMEYI AVRENLVRAQ LAERLATERM PKKGHSFNAS IPEQITAEFV RDEVARGRAV IPNNINHPES EPMIIGRNFL IKVNANIGNS AVTSSIEEEV DKLVWSIRWG ADTVMDLSTG ENIHETREWI LRNSPVPIGT VPIYQALEKV NGKAEDLTWE IFRDTLIEQA EQGVDYFTIH AGVRLAYVPL TANRLTGIVS RGGSIMAKWC LSHHKESFLY ERFDEICEIM KAYDVCFSLG DGLRPGSIAD ANDEAQFAEL HTLGELTQIA WKHDVQVMIE GPGHVPLQLV KENVDKQLEA CFEAPFYTLG PLITDISPGY DHISSAMGAA NIGWYGTAML CYVTPKEHLG LPNRDDVKQG LIAYKIAAHA GDLAKGYPGA QMWDNAVSKA RFEFRWEDQF RLAIDPDTAM AYHDETLPKE NAKVAHFCSM CGPKFCSMKI SQEVREFARL NPASTTLAAP GVIAIKQIDS GFEEKAKEFR EGGSEIYS
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