Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0035 |
Symbol | |
ID | 4012408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 37198 |
End bp | 38217 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637939721 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_546900 |
Protein GI | 91785948 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG TCACCCGCCG CAGCGTCCTG CGCACCCTGT CCGCCGTCCC TGCGGCCGGC ATTGCCGCAG CCCTGCCCTC GATGGCGCGC GCCGCCGAGT TTTCCTACAA ATACGGCAAC AACCTGCCCG TCACCCATCC GCTGAACATC CGCGCCCAGC AGGCCGCCGA CCGCATCCTG AAAGAAACGA ACGGCCGGGT CGAGATCAAG ATCTTCCCGA ACAACCAGCT CGGCGGTGAC ACCGACATGC TGGCGCAGGT GCGCTCCGGC GGCATCGAGT TCTTCACGCC CTCGGCGCTG GTCATCGCCA CGCTGGTGCC GGTGGCGGCC ATCAATGCCG TCGGCTTTGC GTTCTCCGAC TACAACCAGG TCTGGGGCGC GATGGACGGC AAGCTGGGCG CGCATGTGCG TGAGGCCATC AGCAAGTCAC GGCTGTATGC GTTTGAAAAA ATGTGGGACA ACGGTTTCCG CCAGACCACC AGCAGCAAGG CACCCGTCAC CAGCGCGAAA GACATGGACG GCCTGAAGAT CCGCGTGCCG GTCAGCCCGC TGTCGATCTC GATGTTCAAG GGCCTGGGCG CCGCGCCGGC CAGCCTGCAG TTCAGCGAGG TGTATTCCTC GCTGCAGACC AAGATCGTCG ACGCCCAGGA AAACCCGCTG CCCATCATCC AGGTGGCCAA GCTGTACGAA GTGCAGAAGT TCTGCTCGAT GACCAACCAC ATCTGGGATG GCTACTGGTT CATCGCCAAC GGCCGCGCCT GGGAAAAACT GCCCGCCGAC CTGAAAACCA TCGTGGCGCG CGCCATCAAT GAAGCTGGCC TGCAGCAGCG CGACGACATC AAGAAGCTCA ACGAAACCGT CGCCGCCGAC CTGCAGTCCA AGGGCCTAGC CATCAACCGG CCGGCCTCCG ACAGCTTCCG GGCCAAGCTG CGCGAAGCCG GGTTTTATGG CGAGTGGAAG GGCCGCTTCG GCGACGAGGC CTGGGGCCTG TTGGAGCAGT CGGTCGGCAA GCTGGCGTAG
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Protein sequence | MTEVTRRSVL RTLSAVPAAG IAAALPSMAR AAEFSYKYGN NLPVTHPLNI RAQQAADRIL KETNGRVEIK IFPNNQLGGD TDMLAQVRSG GIEFFTPSAL VIATLVPVAA INAVGFAFSD YNQVWGAMDG KLGAHVREAI SKSRLYAFEK MWDNGFRQTT SSKAPVTSAK DMDGLKIRVP VSPLSISMFK GLGAAPASLQ FSEVYSSLQT KIVDAQENPL PIIQVAKLYE VQKFCSMTNH IWDGYWFIAN GRAWEKLPAD LKTIVARAIN EAGLQQRDDI KKLNETVAAD LQSKGLAINR PASDSFRAKL REAGFYGEWK GRFGDEAWGL LEQSVGKLA
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