Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0031 |
Symbol | |
ID | 4012404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 31696 |
End bp | 33045 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637939717 |
Product | type III effector Hrp-dependent outers |
Protein accession | YP_546896 |
Protein GI | 91785944 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCGA GCCATAAAGA CAGCACGCTG AAGATCGCCT ACTACGGCGA TGACTTCACG GGCGCCACCG ACACGCTCGC CACCGCCGCG CGCGCCGGCC TGCGCACGCT GCTGTTCCTG GGCCTGCCCA CCGCCACGCA ACTCGAACGC GCCGGCCCGC TCGACTGCCT GGGCATTGCC GGCGCCGCAC GCGCCATGAC CCCGGCCGAA ATGCAGCTGG AGCTCGAGCC GGTGGGCCGC TTGTTCGCGG CGCTCGGGGC GCCCGTCATG CATTACAAAA CCTGCTCCAC CTTTGACAGC GCACCGCACA TCGGCAGCAT AGGCGCGGCC CTTCGCATCC TGCGGCCGCA TGCCGGCAAC GCGCTGGTGC CCATCGTCGG TGGCCAGCCC AACCTGCACC GCTACTGCGT GTTCGGCAAC CTGTTTGCCG GCACGGGCAA CGGCGGCGCG ATCCACCGGC TGGACCGTCA CCCGACGATG CGCCAGCACC CGGTGACGCC CATGCACGAG GCCGACCTGC GCCTGCACCT GGCGCAGCAG GGGCTTGAGA ACTTGAGTGC CATCGCCTAC CCCGACTATG CGCAGCTCGA TGAAGCGCTG GATCGGCAGC TTGACGCCCT CCTCGCACAG GGACCGGATG CCGTGCTGTT TGACATCGCC CATCCGGACA ACCTCGCCGC CGTGGGCCGC CTGATCTGGC AGCACGCCCG GCGCCAGCGC CTGCTCGCCG CCGGGCCCAG CAGCGTGGTG CAGGCCCTGG CCGCGCACTG GCAGAGCGGA GCCGGCCCCG CCCGGACGGC CATTGCGCCG GCGCAGGGCC CGGTGCTGGT GCTCGCCGGC AGCCTGTCGC CGCTGACGGC GCGCCAGGTC AAGGCCGCCA CGTCTTACGA ACACATTGCG CTCGATGCGC CCCGGCTGGC CGGCGACGAA AACTACCGGA TGCAGATGGC CCGCCAGATC GCCACGCGGC TGGACCAGGG CGCCCACGTG CTGGCCTGCA CCTCGGGCGC AGACGGTGCT ACCGTGAGCA CAAGCTCCAG TACCAGTAGC AGCCCCACCG ACGGGCGCGC GCTGGCACAG GCCTGCGGCG ACTTGCTGGC GCACGTGCTG GCCACCCGGC CGATCAGGCG CCTGGGCATT GCCGGGGGCG ACACCTCCAG CCATGCCGTG CAGGCCCTCC AGGCCTGGGG GCTGTCTTAC CGCGCCCCCC TGGCGCCCGG CGTGGCGCTG TGCCGGCTGC ACAGCGAGCA AGCGTCCCTC GACGGGCTGG AGATCATGCT CAAGGGCGGG CAGATGGGTG GCGAGACACT GTTTGAAGAA CTGCTGGCCG GCACGCCCTT GCCGGTTTAA
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Protein sequence | MQASHKDSTL KIAYYGDDFT GATDTLATAA RAGLRTLLFL GLPTATQLER AGPLDCLGIA GAARAMTPAE MQLELEPVGR LFAALGAPVM HYKTCSTFDS APHIGSIGAA LRILRPHAGN ALVPIVGGQP NLHRYCVFGN LFAGTGNGGA IHRLDRHPTM RQHPVTPMHE ADLRLHLAQQ GLENLSAIAY PDYAQLDEAL DRQLDALLAQ GPDAVLFDIA HPDNLAAVGR LIWQHARRQR LLAAGPSSVV QALAAHWQSG AGPARTAIAP AQGPVLVLAG SLSPLTARQV KAATSYEHIA LDAPRLAGDE NYRMQMARQI ATRLDQGAHV LACTSGADGA TVSTSSSTSS SPTDGRALAQ ACGDLLAHVL ATRPIRRLGI AGGDTSSHAV QALQAWGLSY RAPLAPGVAL CRLHSEQASL DGLEIMLKGG QMGGETLFEE LLAGTPLPV
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