Gene Bpro_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0031 
Symbol 
ID4012404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp31696 
End bp33045 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content71% 
IMG OID637939717 
Producttype III effector Hrp-dependent outers 
Protein accessionYP_546896 
Protein GI91785944 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGA GCCATAAAGA CAGCACGCTG AAGATCGCCT ACTACGGCGA TGACTTCACG 
GGCGCCACCG ACACGCTCGC CACCGCCGCG CGCGCCGGCC TGCGCACGCT GCTGTTCCTG
GGCCTGCCCA CCGCCACGCA ACTCGAACGC GCCGGCCCGC TCGACTGCCT GGGCATTGCC
GGCGCCGCAC GCGCCATGAC CCCGGCCGAA ATGCAGCTGG AGCTCGAGCC GGTGGGCCGC
TTGTTCGCGG CGCTCGGGGC GCCCGTCATG CATTACAAAA CCTGCTCCAC CTTTGACAGC
GCACCGCACA TCGGCAGCAT AGGCGCGGCC CTTCGCATCC TGCGGCCGCA TGCCGGCAAC
GCGCTGGTGC CCATCGTCGG TGGCCAGCCC AACCTGCACC GCTACTGCGT GTTCGGCAAC
CTGTTTGCCG GCACGGGCAA CGGCGGCGCG ATCCACCGGC TGGACCGTCA CCCGACGATG
CGCCAGCACC CGGTGACGCC CATGCACGAG GCCGACCTGC GCCTGCACCT GGCGCAGCAG
GGGCTTGAGA ACTTGAGTGC CATCGCCTAC CCCGACTATG CGCAGCTCGA TGAAGCGCTG
GATCGGCAGC TTGACGCCCT CCTCGCACAG GGACCGGATG CCGTGCTGTT TGACATCGCC
CATCCGGACA ACCTCGCCGC CGTGGGCCGC CTGATCTGGC AGCACGCCCG GCGCCAGCGC
CTGCTCGCCG CCGGGCCCAG CAGCGTGGTG CAGGCCCTGG CCGCGCACTG GCAGAGCGGA
GCCGGCCCCG CCCGGACGGC CATTGCGCCG GCGCAGGGCC CGGTGCTGGT GCTCGCCGGC
AGCCTGTCGC CGCTGACGGC GCGCCAGGTC AAGGCCGCCA CGTCTTACGA ACACATTGCG
CTCGATGCGC CCCGGCTGGC CGGCGACGAA AACTACCGGA TGCAGATGGC CCGCCAGATC
GCCACGCGGC TGGACCAGGG CGCCCACGTG CTGGCCTGCA CCTCGGGCGC AGACGGTGCT
ACCGTGAGCA CAAGCTCCAG TACCAGTAGC AGCCCCACCG ACGGGCGCGC GCTGGCACAG
GCCTGCGGCG ACTTGCTGGC GCACGTGCTG GCCACCCGGC CGATCAGGCG CCTGGGCATT
GCCGGGGGCG ACACCTCCAG CCATGCCGTG CAGGCCCTCC AGGCCTGGGG GCTGTCTTAC
CGCGCCCCCC TGGCGCCCGG CGTGGCGCTG TGCCGGCTGC ACAGCGAGCA AGCGTCCCTC
GACGGGCTGG AGATCATGCT CAAGGGCGGG CAGATGGGTG GCGAGACACT GTTTGAAGAA
CTGCTGGCCG GCACGCCCTT GCCGGTTTAA
 
Protein sequence
MQASHKDSTL KIAYYGDDFT GATDTLATAA RAGLRTLLFL GLPTATQLER AGPLDCLGIA 
GAARAMTPAE MQLELEPVGR LFAALGAPVM HYKTCSTFDS APHIGSIGAA LRILRPHAGN
ALVPIVGGQP NLHRYCVFGN LFAGTGNGGA IHRLDRHPTM RQHPVTPMHE ADLRLHLAQQ
GLENLSAIAY PDYAQLDEAL DRQLDALLAQ GPDAVLFDIA HPDNLAAVGR LIWQHARRQR
LLAAGPSSVV QALAAHWQSG AGPARTAIAP AQGPVLVLAG SLSPLTARQV KAATSYEHIA
LDAPRLAGDE NYRMQMARQI ATRLDQGAHV LACTSGADGA TVSTSSSTSS SPTDGRALAQ
ACGDLLAHVL ATRPIRRLGI AGGDTSSHAV QALQAWGLSY RAPLAPGVAL CRLHSEQASL
DGLEIMLKGG QMGGETLFEE LLAGTPLPV