Gene Bpro_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_0009 
Symbol 
ID4011745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp9806 
End bp10417 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content67% 
IMG OID637939695 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_546874 
Protein GI91785922 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCCA TTGCTGTCAT CGACTTCGAA ACCACGGGCC TGTCGCCGGC CATGGGCGAC 
CGCGCCACCG AGGTGGCCAT CGTGCTGGTG GAGGGCGGCC GGGTGGTGGA CCGCTTTCAG
AGCCTGATGA ACGCGGGGGT GCGCATCCCG GCCTTCATCA CCAGCCTGAC GGGCATCACC
AATGCGATGG TGGCCTCCGC GCCCGATGCC GCGACCGTCA TGACTGACGC CAACCGCTTT
GTGGGCAACG CGCCGCTGGT GGCGCACAAC GCCTCGTTTG ACCGCAAGTT CTGGGAGGCC
GAGCTAAGCC GTGCAGGGGA GAGGGCGAGC CAGCCGTTTG CCTGCACCAT GCTGGTGTCC
AGGAGGCTCT ACCCCCAGGC GCCTAGCCAT AAACTGGGCG TGCTGGTCGA TTACCACCAC
TTGCCTAAAG CGGGCCGCGC CCACCGGGCA CTGGCCGATG CGGAAATGGC GGCGTCGCTG
CTGGGCCAGA TTCAGCATGA CCTGCGTAGC CGCCACGGCG TGGACCGACC CGACCATGCC
CTGCTGATGG CCTTGCAGCG CTGCGCCAAG CCGGCGGTGC GCGCGCTGAT GGCGCAATAC
ACCGGCGCGT GA
 
Protein sequence
MKPIAVIDFE TTGLSPAMGD RATEVAIVLV EGGRVVDRFQ SLMNAGVRIP AFITSLTGIT 
NAMVASAPDA ATVMTDANRF VGNAPLVAHN ASFDRKFWEA ELSRAGERAS QPFACTMLVS
RRLYPQAPSH KLGVLVDYHH LPKAGRAHRA LADAEMAASL LGQIQHDLRS RHGVDRPDHA
LLMALQRCAK PAVRALMAQY TGA