Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_0004 |
Symbol | |
ID | 4011740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 5583 |
End bp | 7565 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637939690 |
Product | hypothetical protein |
Protein accession | YP_546869 |
Protein GI | 91785917 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0778574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGAGTC GGGCCTACTA CTCAGAACTC ATTGAAGAGT TCGTCGGTGA GTCGTCAGAC CAAATATTGG GGGTTCTTTC ACGGCGCAGT TCCTTTGCTG TTGAAGGGAC TCAGCGTGAT GCATGGGTAG AACAGATTCG AATACTTAAA CGAATCCTGG CCCCATACCG TCGGCGTGGA AAAGTTTACT TTGAGTACTC TGTTCCGAGG CTGGGCAAAC GAATCGATGT GATCGCGGTT ATTGATCACG TCGTATTCGT TCTCGAATTT AAGGTTGGCG AGTCCGAGTT TTCGAGCAGC GCAATTGACC AGGTATGGGA CTACGCGCTG GATCTGAAAA ACTTTCATGA GACAAGTCAT GACAAACCAG TTGCTCCGAT TCTTGTTGCG ACGAGGGCTG AAAGCGGCGC AACTGTAGTT GCTGCTGCCC ACGACGACAT AGTTCTTCGC CCAATCCTTG TCGCGTCAGA TGATCTGTCA GTTGCTATTG AGCAAGTGCT GGCTTTGTGC GATGGACCCA TCATTTCCCC TTCTGTTTGG GAAAGAGGGC GGTATTACCC AACCCCGACC ATTGTTGAAG CCGCAATGGC TTTGTACGGA GGGCATGCTG TTGCCGAAAT ATCACGCAAT GACGCGAGTG CGATCAATCT GAGCCGGACT TCTGAATCTG TTGCAGAGGT CATCCGTTCC GCAAAAGAGA ATTCCAGAAA GGCAATTTGT TTCGTCACGG GTGTGCCTGG TGCTGGAAAG ACGCTCGTTG GGCTGAACAT TGCAACCAAG CATATTGACA AGGACAGCGA GCTATACAGC GTCTTTCTTT CTGGGAATGG TCCGCTGGTC GATATCCTGA GGGAGGCTCT TGCGCGCGAT CGGGTGTCGA GGGAGGTGGC CACGGGACGA AAGATGAAGA AGGGCACGGC CGTCAGTGAA GTGAAGGCGT TCATTCAGAA CGTCCATCAT TTTCGCGATG ATTGTTTGCA GGATATGGCG CGGCCACCGG TTGAACACGT TGCAATTTTT GACGAGGCGC AGCGCGCATG GAATCTTGAG CAGACCGCCG CCTTTATGAG TCGTAAAAAA GGGCGGGCTG ACTTCAAGCT GTCGGAGCCG GAGTTCTTGA TCTCTTGTTT GGACCGCCAC CAGGACTGGG CGGTTGTAGT TTGCTTGGTA GGTGGCGGAC AAGAAATCAA TACAGGGGAG GCCGGCATCG GCGAATGGAT TCAATCATTG CAGCGCTCGT TTCCAGAATG GCGAATTCAC ATTTCTCCGC AACTTCATGA TGAAGAGTAC GGTGCAGGAG CGGTCATGCG AGAAATTGCT GATCGTCCAG GCGTCCACTT GAACGAACAT CTTCATCTGG CCGTGTCAAT GCGGTCATTT CGAGCGGAGC ATGTTTCAGC CTTGGTCAAA CACTTGTTGG ATCGCGACGC TGATGCCGCC AGGGCTATGC TTGCGCGGGT TCAGGACCGC TATCCAATCG TTGTTACCCG AAGCCTGCAA AAGGCTAAGA GTTGGCTTAA GCAGCAAGCC CGAGGTTCGG AACGGTTTGG AATGGTTGTT TCTTCGCAAG CGCAGAGATT GAGGCCTCAT GCAATTGACG TGAGGTCGCC GATGGATCCA ATCCACTGGT TCTTGGATGG AAAACATGAT GTGCGGTCAT CGTTCTATTT GGAGGACGTG GCAACTGAAT TCCATGTCCA AGGACTTGAG CTTGATTGGG CATGTGTAGT TTGGGACGCT GATTTTCGTT ACGGGCACGA CGGATGGCTA CATCGTTCGT TTGTGGGGAG CAAGTGGAAC AAGATTAACT TGCCACACCG GCAGACATTT TTAAAGAACG CCTACCGTGT GTTGCTGACA AGGGCGCGAC AAGGAATGGT GATCGTTGTC CCCGAGGGAG ATATCGAGGA CCCGACCCGG GCCCCATCTT TCTATGACCC AACCTTTGAT TACTTGAGCA GTATTGGCTT TAGTCAGAGT TAG
|
Protein sequence | MTSRAYYSEL IEEFVGESSD QILGVLSRRS SFAVEGTQRD AWVEQIRILK RILAPYRRRG KVYFEYSVPR LGKRIDVIAV IDHVVFVLEF KVGESEFSSS AIDQVWDYAL DLKNFHETSH DKPVAPILVA TRAESGATVV AAAHDDIVLR PILVASDDLS VAIEQVLALC DGPIISPSVW ERGRYYPTPT IVEAAMALYG GHAVAEISRN DASAINLSRT SESVAEVIRS AKENSRKAIC FVTGVPGAGK TLVGLNIATK HIDKDSELYS VFLSGNGPLV DILREALARD RVSREVATGR KMKKGTAVSE VKAFIQNVHH FRDDCLQDMA RPPVEHVAIF DEAQRAWNLE QTAAFMSRKK GRADFKLSEP EFLISCLDRH QDWAVVVCLV GGGQEINTGE AGIGEWIQSL QRSFPEWRIH ISPQLHDEEY GAGAVMREIA DRPGVHLNEH LHLAVSMRSF RAEHVSALVK HLLDRDADAA RAMLARVQDR YPIVVTRSLQ KAKSWLKQQA RGSERFGMVV SSQAQRLRPH AIDVRSPMDP IHWFLDGKHD VRSSFYLEDV ATEFHVQGLE LDWACVVWDA DFRYGHDGWL HRSFVGSKWN KINLPHRQTF LKNAYRVLLT RARQGMVIVV PEGDIEDPTR APSFYDPTFD YLSSIGFSQS
|
| |