| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_2626 |
|---|
| Symbol | |
|---|
| ID | 4001723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | - |
|---|
| Start bp | 2830065 |
|---|
| End bp | 2831864 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637939550 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_546730 |
|---|
| Protein GI | 91776974 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAT CTGCCTCTGC CATTGAGATT GCGCGCAAAA CGCTGATACA GCTTTCCTCG
CGCAAGATAC CGCCCACGCC GGATAATTTC CGTATTGTCT ATGACGAAAT TGCCGGGGTG
AAATCCATGG ACAGCGCTTC CGGGCTTGCC GATTCATTGC ATGAGGTGTT GCTCGCCGCC
GGCGTACAGA ACCCGAAATA TCTGGTGGCG GCGCAGGCGA TCAAGCAATC GGTGGATGCC
GGTAACTGGA CGCGTTTCAA GGAGCAGCTC AGCAACCTGC TGCCGCAGGC GGCACCAGAG
GATGAAGTCA CCTGGCCAGT GGCGCTTCGG CACTTGCTCA AGCAACTGGA GGTCAGCCAC
AAGGGCATCA CCCTTAGCCG CAAGCGCGAA GGCTTGCAGC GCCTGCTGAG CAATTTCGAG
CAGGACCCGG GATTGCCACA GAAAATCCAC GCCCTGGCAA GCTCATGGGG GTCCGGCATC
AGCGAGAACC TGGTGAATGA CGCGCAGCAG GAAGGCGTGC CGGCCCAGGA TGCCGCCCCA
GTGCCAGCTG GTGACGGGCA GGAATCAGCG CGTGCCTACT ATGCGAGAAT CGCAGACCAC
TGGCGCAACA TGCTGATGCG CACCATCAAG CTGATCGTGA TTCCGCAGCT GGCTGCTTGG
CCAGAAATGG CGAAAAAGGC TGAAGCCTTG CTCGAGGATA TCCGCCTTGC TTATGCGGAA
CACGATGTGC TCAAGCAGGG GGAGGCCCTG AAGTCCATCT TGTTCACGCT GGAAATGCAT
GGCGATACTC AGCAGCGCAC CCATGAGGGA CTGCTGCAAT TGCTGCGCCT GGTAGTCACC
AGCATGAATG AGCTGGTGAT GGAAGACAAG TGGCTGCATG GGCAGACCAT GATCGTGCAG
GAGCTGCTGC AGAAACCGTT GTCACTGGAT ATGCTCTACG ACGCGGAAAG CAGCCTGAAG
GAGCTGATCT TCAAGCAGGG TCAGCTCAAG CCCCGCTTGC TGGATGCGCG GGACTCCATG
AAGAAAATGG CAGAAGTCTT TGTCGGCCGC CTCGCGGACC TGGTAGACAG CACCAACGAA
TACCAGGAAA AAATCGACGG TTACAGGCAG AAAATCACGG AATCTGAAGA CATCGTCGAG
CTGAATGCGC TGATTGACCA TATGCTGGAA GACACGCGCA GCATCAGCTT CAATATCCGC
CAGTCGCGGG AAATCCTGGC AGAGACACAG CAACGCGTAG CCGAATCGGA ACGCCTGGTG
CAGGAGCTGA CCGCCAAGCT GGAGCATGTG AACGAAGTCG CGCACGAGGA CTTCCTGACC
GGAACCTTGA ACCGGCGCGG CATGGAGCAG GCACTGGAGC GCGAGTTTGA CCGGGCGAGG
CGCCATGCCA CGCGGTTGAG CCTGGCCATG ATGGATATCG ACCATTTCAA GCGCCTCAAC
GACAGGCTGG GCCATGCGAC GGGCGACAAG GCGCTCGTGC ATTTGTCCAA GGTGCTCAAG
GCTTCATTGC GCAGTACCGA TGTGCTGGCG CGCTATGGCG GCGAGGAGTT CATCATCATC
CTGCCGGACA CGGGAGAAGC CGAGGCTGTG GAAATCATGA AGCGCGCCCA GCGGGACCTC
ACACGTAATT TCTTCATGCA CAACAATGAG CGTGTCCTGA TCACCTTCAG CGCCGGTGTT
GCGGAGCGGG AACAGGATGA ACCTCCCGAG TCCTTGGTGC CACGCGCGGA CAGGGCGCTG
TATCACGCCA AGCAGGCAGG CCGCAACATG GTGGCAGGCG CGGCCGATAT TGCCGATTGA
|
|---|
| Protein sequence | MQESASAIEI ARKTLIQLSS RKIPPTPDNF RIVYDEIAGV KSMDSASGLA DSLHEVLLAA
GVQNPKYLVA AQAIKQSVDA GNWTRFKEQL SNLLPQAAPE DEVTWPVALR HLLKQLEVSH
KGITLSRKRE GLQRLLSNFE QDPGLPQKIH ALASSWGSGI SENLVNDAQQ EGVPAQDAAP
VPAGDGQESA RAYYARIADH WRNMLMRTIK LIVIPQLAAW PEMAKKAEAL LEDIRLAYAE
HDVLKQGEAL KSILFTLEMH GDTQQRTHEG LLQLLRLVVT SMNELVMEDK WLHGQTMIVQ
ELLQKPLSLD MLYDAESSLK ELIFKQGQLK PRLLDARDSM KKMAEVFVGR LADLVDSTNE
YQEKIDGYRQ KITESEDIVE LNALIDHMLE DTRSISFNIR QSREILAETQ QRVAESERLV
QELTAKLEHV NEVAHEDFLT GTLNRRGMEQ ALEREFDRAR RHATRLSLAM MDIDHFKRLN
DRLGHATGDK ALVHLSKVLK ASLRSTDVLA RYGGEEFIII LPDTGEAEAV EIMKRAQRDL
TRNFFMHNNE RVLITFSAGV AEREQDEPPE SLVPRADRAL YHAKQAGRNM VAGAADIAD
|
|---|
| |