| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_2445 |
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| Symbol | |
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| ID | 4001541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacillus flagellatus KT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007947 |
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| Strand | - |
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| Start bp | 2623412 |
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| End bp | 2624224 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637939371 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_546551 |
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| Protein GI | 91776795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000308711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.608428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGTT ACGCCGTCAT CGGCCACCCG GTGGAGCACA GCAAGTCGCC TTTGATTCAT
GCGGCTTTTG CGCAGCAGAC GGGGCAGCAG CTTGAATATG GCAAGGTGCA GGCTCCCCTG
GATGGATTCG TTGCCATCGT GACCGATTTG CAGGAAAAAG GCTATCGAGG GGTTAATGTC
ACCGTGCCTT TCAAATTTGA GGCTTATTCC CTGGCGACGG AGCTGACACC ACGGGCACGT
GATGCTGGTG CGGTGAACAC ACTGACTTTC ACGGACGGCG CCATTCATGG CGACAATACG
GATGGCGTCG GGCTGGTGCG CGATATCCTG CAGAACCTGG CATTCACCCT GGCAGGCAAG
CGTGTGCTGC TACTGGGGGC AGGAGGCGCT GCGGAGGGAG TATTGGCCCC CCTGTTGGAA
GCGTCTCCCT TGTCACTCTG CATTGCCAAC CGCACCGTGG ACAAGGCAGA GGCGATGGCG
GCACGTGTGA GGCCGGGTCA AACTTCATTG GACGCGCGCG GTTTCGATGC CCTGGCCGAC
CAAGAGTTCG ATGTCGTGAT CAATGCTACT TCCAGCGGCT TGCACAACGA GCGGCTGCCC
TTGCCATCCG GATTGTTTGC AGCCGATGCC TTGGCATATG ACATGATGTA CGGGCGCGAG
ACGCCCTTTA TGCGGTATGC GCGTGAGGAA GGCGCCAGCA GAATTGCCGA TGGGTTGGGC
ATGCTGGTGG AGCAGGCAGC GGAAGCCTTT TATATCTGGC GCAGGGTGCG GCCTGATACT
GCGCCTGTGA TGGCCGCATT GCGGGCCGCA TGA
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| Protein sequence | MDRYAVIGHP VEHSKSPLIH AAFAQQTGQQ LEYGKVQAPL DGFVAIVTDL QEKGYRGVNV
TVPFKFEAYS LATELTPRAR DAGAVNTLTF TDGAIHGDNT DGVGLVRDIL QNLAFTLAGK
RVLLLGAGGA AEGVLAPLLE ASPLSLCIAN RTVDKAEAMA ARVRPGQTSL DARGFDALAD
QEFDVVINAT SSGLHNERLP LPSGLFAADA LAYDMMYGRE TPFMRYAREE GASRIADGLG
MLVEQAAEAF YIWRRVRPDT APVMAALRAA
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