| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_2435 |
|---|
| Symbol | |
|---|
| ID | 4001531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | + |
|---|
| Start bp | 2608188 |
|---|
| End bp | 2610116 |
|---|
| Gene Length | 1929 bp |
|---|
| Protein Length | 642 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637939361 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_546541 |
|---|
| Protein GI | 91776785 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAAACA GCCGCAAGTA CTTCATGTTT AAATGTACAT GGCCTATGTT AGTGGTGACA
GCAGCCTGGG CTGCCGAACC GCAAGGGGAA ACCACAAATG CACCTGCCAG CGCATTGCAG
ACTGCTTCCA GCGCCGCCCA CGCGGCAGTT GAGGCTGCCA ATGCGGCGGC CGCAGCAGCC
ACGGCCGCCG CGAATGCCGC TACTGCGGCC GCGAATGCAG CCAGCGAAGC AGTCAAGGCC
ACCGAGCAGG GCTTGAAGCA ACCACAGCTA GTCGTCGCGC CAACGACGCC GGAGCAGCTG
GCTTCTCCCC CTGCCAGTGC AGCGCCTGCC CTTGTTGGCA ACACTCCCCT GCAACAGCAG
GCAGCCCAAC CCAATGTGGC ACCAATCGGA CTGCAATCGC TGAACCTGGA CTTGCCGACA
CAGGCTCAAT CCGTGGCTGC AGTCGACGAG CTCCACTTGT CACGCCTGTT TGGCACCAGC
ATCATCCCGG TGGCAGTAGC CAATGAAATC CACAATGAAT ACCTGAGCAG CGAGTATGCA
GATCAGGTTC ATTCCGAGCA GTCACCGGCC ACCGTCACCG ACACCATGGA TATCCGCGCG
GCAACCGATG CCGCCGTCGA TTTCAGTCGC GATGTGCATA TCGCCGATGA ACGCCTGAAC
CAGGCCGAAG CGCAATCCAA GCAGGCACGC GGCCTGTTGC TACCCAATCT TTCCGTGCGC
TATGGCAAGG GGCGTGAAAT CTCCTCACCC TCTTCCGCCA TTAATGCCCG TACCGGCTCC
CGCATGGAGG AATCGCACCA TACCCGCACT GACCGCATCA TTACCCTGCG CCAGCCGCTG
ATGGACTTGA CCAGCATTTA TGACTGGAAG CGCCGCCAGG CCATCATCAG TGCACGCGAG
GAAAGCCGCC GCGGCAGCCA GGGGGATGCC TGGCTTTCCA CCGTCAATGC CTACCTCGGC
CTGACCACCA GCCGCCTGAT TGCCGACCTG TCGCTGGGCT ATGAAAACCA GCTCAACGAA
CTGTTCACTT ATGTGGACAA GCGCGCTGCC GCCGGCGCCT CCAGCGATGC CGACCGCGAG
CGCGTGCGCG CCCGCAGCCT GGCCGCGCGC TCGGCACGTA CCCAACAAGA AGCCGCGCAC
TCGGCTGCCA GCATCGAATT CCTGCGCCTG ACCAACATCG CACCACAGAA TATCCGGCTG
CCGGAGCGTG AAGACATGGG CACCATCCCG TCAACGGCAG CCGAAGCCAT CAAGATCGCG
ATGGACAACA GCCCCGACAT CGCATCAATT CGGGAAGAAC TGCGCGCGTC CCAAATAGAC
CACAATGTGG CCCGGTCACG TTACGCGCCT CGCCTCGACC TGGAGCTTTC CAGGTGGACC
ACGGACAACG CAGGCGGCCC CGTGGGCGAG CAGGACGACA AGCGCTTCAT GGTCGTCCTG
AACTGGAACC TGCTGAATGG TGGTGCCGAC TACTACATGG CGCGGGAGAA ACTGTCGCGC
ATCGAGGAAA TCCGTTACCG CCTGGACGAC CTGCAGCGCC GCATCAGCCA GGCCATGATC
TCGCAATATG CCATTCTTGA GTCCACCCGC GAGCAACTCG TTGCCGGATA CCGCGAATTG
AATGCGATCA CTTCCGCAGT AACTGCAATG TCTGAAAAGA TGCTGGCAGG CAACCAGTCG
CTGCTGGATC TGCTGGATGT CTATGACCGC CAATACCAGG CCCGTACCCG CTTGGTGACG
CTGCATGCCC AGGAAATCGA CGCCCTCTCG CAAATCAATC GCTTGCTCGG ACAATCCCGG
CCCATGACCA TGGTTGCCGA CGGCAAGGCG CCAGGTTTCG GTCCTGCCAC GCCGCATGCT
GAAGACACCG TGACCATGCC GTTGGACCTG CAAGAAGAAG GCACGGCTAC GCCGCTACCC
AAGGAATAG
|
|---|
| Protein sequence | MSNSRKYFMF KCTWPMLVVT AAWAAEPQGE TTNAPASALQ TASSAAHAAV EAANAAAAAA
TAAANAATAA ANAASEAVKA TEQGLKQPQL VVAPTTPEQL ASPPASAAPA LVGNTPLQQQ
AAQPNVAPIG LQSLNLDLPT QAQSVAAVDE LHLSRLFGTS IIPVAVANEI HNEYLSSEYA
DQVHSEQSPA TVTDTMDIRA ATDAAVDFSR DVHIADERLN QAEAQSKQAR GLLLPNLSVR
YGKGREISSP SSAINARTGS RMEESHHTRT DRIITLRQPL MDLTSIYDWK RRQAIISARE
ESRRGSQGDA WLSTVNAYLG LTTSRLIADL SLGYENQLNE LFTYVDKRAA AGASSDADRE
RVRARSLAAR SARTQQEAAH SAASIEFLRL TNIAPQNIRL PEREDMGTIP STAAEAIKIA
MDNSPDIASI REELRASQID HNVARSRYAP RLDLELSRWT TDNAGGPVGE QDDKRFMVVL
NWNLLNGGAD YYMAREKLSR IEEIRYRLDD LQRRISQAMI SQYAILESTR EQLVAGYREL
NAITSAVTAM SEKMLAGNQS LLDLLDVYDR QYQARTRLVT LHAQEIDALS QINRLLGQSR
PMTMVADGKA PGFGPATPHA EDTVTMPLDL QEEGTATPLP KE
|
|---|
| |