Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mfla_2414 |
Symbol | |
ID | 4001510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacillus flagellatus KT |
Kingdom | Bacteria |
Replicon accession | NC_007947 |
Strand | - |
Start bp | 2585482 |
End bp | 2587455 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637939340 |
Product | type II and III secretion system protein |
Protein accession | YP_546520 |
Protein GI | 91776764 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4796] Type II secretory pathway, component HofQ |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGTCGA GTTATGCATG GCGCGCCGCG GGCCTTGTCA ATATCTTATT GCTGCTGTCC TCCTGTGCGA CTACTCCTTG GCCCAAACCC GGGTTCCCAG GGGATACGCC CGAGGAAAAA ATTGCCAATA CACGGGCAGC GCGTGAAAAA AAACCGGAAG GTACTGCCGA GCGTCAGCGC GTCAGGCTGG CGCAGGAGCA GGGGATCAAC CAATTGCTGG CCGAGGCCGA GGCTGCCCTG CGCGACAGGC GCATGGCCGA TGCGGGGGAA TTGTTCCGTC GCGTGCTGGC GATAGAACCG GATAATCCAC GGGCGCAGTC GGGTGAACTG TTGATCGAAA GCACCCGCAA ACATGCGGAG CAGGTACAGC AGGCAAGCCA GTTGCTGGAA AAAGGCGAGA TCGAGGCTGC GCGCGATATC CTGCACCAGG TCCTGCTGGA AGCGCCGCAG CATGAGGAAG CGTTGCGCTT GCAGCGCGAG ATCCGCCAGC AGCGTACGAA TGTGCGCATG GACCCACCCA AGCTCAAGCC TGCCTTCAAC AAGCCGGTGA GCCTGGAATT GCGCGACGCC AATATCAAGA TGGTGTTCGA GGCATTGTCG CGCGCGACGG GCATCAACTT CATCCTCGAC AAGGATATCA AGCCCGAGAC CAAGGCGACG GTCTTCATCA AGAAATCACC AGTCGATGAA GCCATCGAAA TGGTGCTGGC GACCAACGGC CTGCAGAAAA AAGTGCTGTC CGAGAACACC GCGCTGGTGT TTCCCAACAC CGCTGCCAAG CTCAAGGACT ATCAGGACCT GGTGATCCGT AATTTCTACC TGACCAATGC CAAGGCCAAG GATGTGTCCA CCATGATCAA GACCATGCTC AAGACCAAGG ATGTGCACAC CGACGAGCGG CTGAACATGA TCGTGATCCG CGACACGCCG GAAGTGGTGC GTATTGCCGA GAAGCTGGTG GCGGCAAATG ACCTGGCGGA CCCGGAAGTG ATGCTGGAGA TCGAGGTGAT GGAAGTGTCG CGAGAACGCT TGCAGGAGCT GGGTATCGAC TATCCCACTT CGTTGACGGC ATCTGCCGGG CTCTCGATCG ACGCCATGCG CAGCAACAAT TCCGGTACCT ATTTGTTCAA CAGCAACCCC ACCCTGAATT TCAGGAAAAC CACGGGCGAC ATCAATATTC TCGCCAATCC GCGCATCCGC GTGCGTAACA ACGACAAGGC GCAGGTGCTG GTGGGCGACA AGGTGCCGGT GATCACTACC GTGGCGACAG CCGGCGTGGG CTCATCCCAA AGTGTGCAGT ACCTGGATGT CGGCCTCAAG CTGGAAGCCG AGCCGCGCAT CACGCTGGAT GATTTCGTCA ATATCAAGAT TGCGCTCGAA GTCTCTTCGC TCGGCAGCTC CACGACGCTC AACGGCGGCG GAGTGGTTTA TCAGATCGGC ACCCGCAACG CGAGCACCCT GCTGCGGCTG AAGGATGGCG AGACGCAGAT TCTGGCGGGG CTGATCAATG ATGAGGAACG CAGGAACACC AGCCGGCTGC CCGGCCTGGG CGATATCCCA CTGCTTGGGC GCCTGTTTTC CAACCAGACG GATAACCGCA AGAAAACCGA GATCGTGCTG GCGATTACGC CGCACGTGGT CAATAACATC AGCCGTCCGG AATCCGAGGT CCTGGAATAT TGGTCGGGTA CGGAAAACGG CATCAGTGAC CATCCGCAGA TCAATGTGCC CGGTACCGGC GCTGCCGCGG CTGGCAATAT GAGCCCGCGT GAGCTGCTGA TGCAGCGTTT GCGTCCCGGG GCAGCGGAAC CTGCCGCTGC GCCTGAGCCT GAGCCGCAAG CAGAGCCCGC ACCAACCGAG GAAAGCCAGC CGGCGCAGCA GGATAACTTC ATGTCTACGC AGCCCAAGCC AGTGGTTCCC CTGGTGACGC CCGAAGTGGT GGTGCCCAGG GCTGCGCCGC AGCAGGCGCA ATAG
|
Protein sequence | MLSSYAWRAA GLVNILLLLS SCATTPWPKP GFPGDTPEEK IANTRAAREK KPEGTAERQR VRLAQEQGIN QLLAEAEAAL RDRRMADAGE LFRRVLAIEP DNPRAQSGEL LIESTRKHAE QVQQASQLLE KGEIEAARDI LHQVLLEAPQ HEEALRLQRE IRQQRTNVRM DPPKLKPAFN KPVSLELRDA NIKMVFEALS RATGINFILD KDIKPETKAT VFIKKSPVDE AIEMVLATNG LQKKVLSENT ALVFPNTAAK LKDYQDLVIR NFYLTNAKAK DVSTMIKTML KTKDVHTDER LNMIVIRDTP EVVRIAEKLV AANDLADPEV MLEIEVMEVS RERLQELGID YPTSLTASAG LSIDAMRSNN SGTYLFNSNP TLNFRKTTGD INILANPRIR VRNNDKAQVL VGDKVPVITT VATAGVGSSQ SVQYLDVGLK LEAEPRITLD DFVNIKIALE VSSLGSSTTL NGGGVVYQIG TRNASTLLRL KDGETQILAG LINDEERRNT SRLPGLGDIP LLGRLFSNQT DNRKKTEIVL AITPHVVNNI SRPESEVLEY WSGTENGISD HPQINVPGTG AAAAGNMSPR ELLMQRLRPG AAEPAAAPEP EPQAEPAPTE ESQPAQQDNF MSTQPKPVVP LVTPEVVVPR AAPQQAQ
|
| |