| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_2322 |
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| Symbol | |
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| ID | 4001418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacillus flagellatus KT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007947 |
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| Strand | - |
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| Start bp | 2479188 |
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| End bp | 2481122 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637939249 |
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| Product | sigma 70 (RpoD) |
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| Protein accession | YP_546430 |
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| Protein GI | 91776674 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000648058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00289182 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGGTCAA GCATGGCTAA AGAGCAACAG AATGACAATG TAAACGATAA AGCCGATATT
ACACTGAATG ACGCAGATAT ACGTCGCACG CGGTTAAAGT CCCTGATTAT CCTGGGTAAG
GAGCGCGGAT ACCTCACTTA CGCAGAAATT AACGATCACC TGCCGGATGA TGTACAGGAT
TCCGAGCAGA TCGACAGCAT CATCGGCATG ATCAACGACA TGGGCATCCA GGTCTATGAA
GAGGCGCCCG ACGCCGAAGC ATTGCTGATG TCCGATGTAC CAGCACCAGT TGCTGACGAG
GATGCCGTTG AGGAAGCCGA GCAGGCCCTT TCTACGGTGG ATTCCGAGTT TGGCCGCACC
ACTGACCCGG TGCGCATGTA CATGCGGGAA ATGGGTACGG TCGATCTGTT GACCCGTGAG
GGCGAAATCG AGATTGCCAA GCGGATAGAA GACGGCCTCA AGCATATGGT GCAAGCTATT
GCCGCCTGTC CCAGTACCAT TGCCGAATTA TTGGCCATGG TGGATCAGGT TGAGAAGGGC
GAGTTGGGGG TCGATGATCT GGTCGATGGC CTGATTGATG CTGACGATGG TCTTGGTGCC
GAAATCGTGG CTGAAGAAGC TGCTGATGCT GGAGATGTGG CTGAAGACGC CGACGAGGAG
GACGAAGAAG ACGATGATGG TGCCAAGGCG GCAGCGATCT CGGCAGAAGC ACTTGCAAGG
CTTCGCGAGG AAGTGCTGAC GCGATTTGCC GTCATCCGTA GCGCTCATGA GAAGATGACC
GTGCTTTTGG CAAGCAAGGG TTCTCAGGAC AAAGAGTATC TCAAGCTGCA GGCTACGATT
ATTGAAGAGC TGATGGCATT CCGCTTTTCA GCCAAGCAGG TTGAGGCATT GTGTGACCGT
GTGCGTGGCA TGGTAGAAGA GATCCGTAGC CATGAACGTA AAATCATGGA CTTCTGCGTC
GAAAAGGCCG GTATGCCGAG GGCGCATTTC ATTAAGAGCT TCCCGGGCAA CGAGGGCAAT
CCAGAGTGGT TGGCTGCGGA ACTTGCCGTC AACAAACCGT ATGTTGAGCG TCTTGAGCGA
TTCAGGCACT CGATCGATGA CCAGCAGCAA CAATTACTTG CCATTCAAGA GCGTGTGGGT
ATTCCCATCA GGGAGCTCAA GGAAATCAAC AAGCAGATGT CCACAGGCGA GGCACGGGCG
CGTCGTGCCA AGCGCGAGAT GATCGAGGCC AACTTGCGTC TCGTGATTTC TATCGCCAAG
AAATACACCA ACCGTGGCCT GCAATTCCTT GACCTGATTC AGGAAGGCAA TATCGGTTTG
ATGAAGGCGG TAGACAAGTT CGAATACCGT CGTGGTTACA AGTTCTCTAC ATATGCCACA
TGGTGGATTC GCCAGGCAAT CACACGCTCG ATCGCAGATC AGGCGCGTAC TATTCGCATT
CCTGTGCACA TGATCGAGAC GATCAACAAG ATGAATCGCA TCAGCCGCCA GATCCTGCAG
GAAACCGGCT TGGAGCCAGA TCCAGCCACC CTTGCGGAAA AAATGGAGAT GCCGGAAGAT
AAGATCCGCA AAATCCTCAA GATTTCCAAG GAGCCTATCT CCATGGAAAC CCCAATTGGA
GATGACGACG ATTCCCACTT GGGTGATTTC ATCGAGGATG TCGCAACACT TGCTCCCGTG
GATGCCGCCG TATACGCAAG CTTGCGTGAT GCCACCAAAG AAGTGTTAGA ATCGCTGACC
GCAAGGGAGG CCAAGGTGTT GCGCATGCGG TTCGGTATTG AGATGAATAC CGACCACACC
CTGGAAGAGG TTGGCAAACA ATTCGATGTC ACCCGCGAAC GTATCCGTCA AATTGAGGCC
AAGGCGCTAC GCAAACTGCG CCATCCAACC CGCTCAGAAC GCCTGCGCAG TTTCCTCGAA
ACTGGCAACG ACTAA
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| Protein sequence | MGSSMAKEQQ NDNVNDKADI TLNDADIRRT RLKSLIILGK ERGYLTYAEI NDHLPDDVQD
SEQIDSIIGM INDMGIQVYE EAPDAEALLM SDVPAPVADE DAVEEAEQAL STVDSEFGRT
TDPVRMYMRE MGTVDLLTRE GEIEIAKRIE DGLKHMVQAI AACPSTIAEL LAMVDQVEKG
ELGVDDLVDG LIDADDGLGA EIVAEEAADA GDVAEDADEE DEEDDDGAKA AAISAEALAR
LREEVLTRFA VIRSAHEKMT VLLASKGSQD KEYLKLQATI IEELMAFRFS AKQVEALCDR
VRGMVEEIRS HERKIMDFCV EKAGMPRAHF IKSFPGNEGN PEWLAAELAV NKPYVERLER
FRHSIDDQQQ QLLAIQERVG IPIRELKEIN KQMSTGEARA RRAKREMIEA NLRLVISIAK
KYTNRGLQFL DLIQEGNIGL MKAVDKFEYR RGYKFSTYAT WWIRQAITRS IADQARTIRI
PVHMIETINK MNRISRQILQ ETGLEPDPAT LAEKMEMPED KIRKILKISK EPISMETPIG
DDDDSHLGDF IEDVATLAPV DAAVYASLRD ATKEVLESLT AREAKVLRMR FGIEMNTDHT
LEEVGKQFDV TRERIRQIEA KALRKLRHPT RSERLRSFLE TGND
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