| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_2223 |
|---|
| Symbol | |
|---|
| ID | 3999779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | - |
|---|
| Start bp | 2374397 |
|---|
| End bp | 2376055 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637939149 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_546331 |
|---|
| Protein GI | 91776575 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00699349 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.959203 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACG ACACCTTGCA CAAAATACAA CCTAGGCACC GGTTGATCGA CCTGCTGAGC
CTGGAACGTA AAGATATCTT ACTGATCATC GTATTGATGG GGGCGGTGGG GTTCATCAAT
CTGGCGATCC CCGTTTCGGT GCAGGCCCTG ATCAATACAG TGACCATGGG CAGCCTGATG
AAGCCGTTGC TCATCATCTC CTTCATATTG TTTGTTTTTC TGCTGCTTGC AGGCTTGTTC
TACGTGCTGG AGATGTTTAT TGTCGAGCTC ATCCAGCGCC GCATTTTCTG CCGTATTGCG
ATTGATGCTG CAAAAAAGAC GCAGGGGGCA AGATACGATG CTGCAGATGT AGACGACCTA
CAGGAGTTGG TCAATCGGTT TTTCGAGGTG ACCTCGGTAC AAAAATCAGT CGCCACTTTA
TTGACGATAG GTGTGGCCAC CATCCTGCAG GGAATGGTAG GCAGCATTAT CCTGGTGTTC
TACAGCATTT ATTTTGGGGT GGTAGTGGCC TTGGTGTTGC TTGTTATCGG GGTCATTGTA
TACGTCATCG GGCATAGAGC ACCGCTGACG GCGATTGCTG AGTCTCATGC CAAGTTTGAA
TTGGCCGCTT GGCTCGAAAC GATAGCCCGT AATCTCAGCA CCTTTAAGTT CTCTTCTGGC
GTGACCTTGG CGCATGAGCG CACCAGTGAG CTTGCATCTG AATATCTGAA AAAACGAAGC
GCGCATTTCC GGATTCTCAT CAATCAATAC CTGGGTGGGG TGTTTATCTA TGCCGTAGGC
GGCACTGCCA TGTTGGCCTT GGGCGGGACC CTGGTGATCA AGGGGCAAAT CAACCTTGGG
CAGTTCGTTG CGGCCGAGCT GATCATCTTT GCCGTCCTGG CATCGTTCCT GCGCTTTATT
GGCCAGCTGG AATACTATTA CGACCTCCTT GCCAGCATGG ACAAAATTGG CCATATCCAA
GACCTCCCCC AAGAAAAGAC GCCGCTACGC CAAGTAGAGA TAAAGCGCCC TATCAAGTTG
AGTGCCGTGA ATCTTAGCTA TCATTACTTG CGGCATACAG CCTCGCAATC CGGCATCAGC
TTTACCCTGC AGCCTGGCCA CAGCCTTGCT GTGCTGGGGG CTGCTGGCAG CGGAAAATCC
TCATTGGCTG CACTGCTCAC TGGCCTGAAG CAGCCAGAAA GCGGGCATGT GGAGTTCAAT
GATATCGCGA TTGACCAATT CAATTTGAAC GAGCTGCGCC AACATATTGG CTGTGTCGGA
AAACTGGAGA TCATTGAAGG CAGTATTATC GAGAATATCC TGATCGGACG GAATGATATT
CCGCTTGGGG AGGTGACTGA GCTGCTGGGC AGACTGGGGT TGATGTCCAG CATCAACCAG
CTGCAGGATG GCCTGAATAC CCAGCTTTCC GTCAATGGTG CGCCGCTTTC CACGACACAG
ATCAATCTCT TGATGTTGGC CAGGGGGATT ATCGGCCAGC CGGCATTGCT GATTGTGGAT
GGCTTGCTCG ACTACCTGGA TGAAGCCGAC TTGGAGCGCG CCCTGCCTTT GCTGCTTGAC
TTGCCAGGGT GCAGCCTTGT CATCATGACG CGCCGTGCAT CGATCGCACA GCACTGCGAT
CAGACCCTTG TGCTGGAGTT GCCTGATCAT GACGCCTGA
|
|---|
| Protein sequence | MNNDTLHKIQ PRHRLIDLLS LERKDILLII VLMGAVGFIN LAIPVSVQAL INTVTMGSLM
KPLLIISFIL FVFLLLAGLF YVLEMFIVEL IQRRIFCRIA IDAAKKTQGA RYDAADVDDL
QELVNRFFEV TSVQKSVATL LTIGVATILQ GMVGSIILVF YSIYFGVVVA LVLLVIGVIV
YVIGHRAPLT AIAESHAKFE LAAWLETIAR NLSTFKFSSG VTLAHERTSE LASEYLKKRS
AHFRILINQY LGGVFIYAVG GTAMLALGGT LVIKGQINLG QFVAAELIIF AVLASFLRFI
GQLEYYYDLL ASMDKIGHIQ DLPQEKTPLR QVEIKRPIKL SAVNLSYHYL RHTASQSGIS
FTLQPGHSLA VLGAAGSGKS SLAALLTGLK QPESGHVEFN DIAIDQFNLN ELRQHIGCVG
KLEIIEGSII ENILIGRNDI PLGEVTELLG RLGLMSSINQ LQDGLNTQLS VNGAPLSTTQ
INLLMLARGI IGQPALLIVD GLLDYLDEAD LERALPLLLD LPGCSLVIMT RRASIAQHCD
QTLVLELPDH DA
|
|---|
| |