Gene Mfla_1978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1978 
Symbol 
ID4000021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp2112824 
End bp2114584 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content58% 
IMG OID637938895 
Productflagellar M-ring protein FliF 
Protein accessionYP_546086 
Protein GI91776330 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein 
TIGRFAM ID[TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCAG CCAATGAAGC GGCCCTGGCC GCCGATACCA CGACCGAAGC ACCAGCCCCC 
GGCTCATTCA ACTTCAAGTC CCTCTTGGAG AACAAGCTGC TGCTGGCCTT GGGCGCTGCT
GCTGTCATTG CATTGATGGT GGTGTTCTGG CTCTGGAGCC AGAAGCCGGA ATACCGCGTA
TTGTTCTCCA GCTATTCCGA CAAGGATGGT GGTGCCATTG TGGCTGCATT GGAACAGATG
AATGTACCGT ACAGGATTGC CGATGGTGGT AGCGCCATTC TGGTTCCGGC CAATCATGTC
CATGACGTCA GACTAAGGCT GGCATCGCAA GGCCTGCCCA AGGGCGGAAA TATCGGTTTC
GAGTTGTTGG AGAACCAGAA ATTCGGCGTT TCCCAGTTTG TGGAGCAAGT GAATTTCCAG
CGCGGCCTGG AGGGTGAGCT GGAACGCACT ATCCAGTCAA TTGGCGCGGT GCAGGCGGCT
CGCATCCACC TGGCCATGCC GAAGCCTACC GTGTTCACGC GTGACCAGCA AAAGCCAACG
GCATCCGTGA TGCTCAACCT GCATCCTGGT CGCGCCCTGG ATCAGCGCCA GGTGAGCGCT
ATCGTGCACC TGGTGGCCAG TAGTGTTCCC GAGCTGCCGA CCTCCAATGT GACGGTAGTT
GACCAGAATG GCAACCTGCT CTCCGACAAT GGCAAGGATG CGGGCAATCA TTATCAACTA
GATCCCACGC AGCTGAAGTA TGTCGATGAA TTGCAGCAAA ACATCGCGCG CCGGGTTGAG
TCCATCATTG CACCGCTGGT TGGCGCCAAG AACGTACATG CGGAAGCCAG TGCCGAAGTG
GATTTTTCCA TGGTGGAGCA GGCTGCCGAA ATCTACAAAC CCAACCAGGC GCCAGACAGC
GCCGCTATTC GCAGCAGCCA GACCAATGAA TCGCAGACAT TGCCAGGGCA GGGAGTGGGC
GGGGTGCCCG GTGCCTTGAC CAACCAGCCG CCGGCACCAG CGACTGCCCC CATCGTGGCG
CCTGGTACTG AGCCCACCAC CACGACCAAT GCCAACGTGG TGACGACCAC GACGACAACG
CCGCCTGGTA CGACAGTGAC GACGCCAGTC ATGAACTCGG AGCGCAATAC CACCACCAAT
TATGAAGTGG ACAAGACCAT CCGCTACCAG CAGCAGCCCA TGGGCGGTAT CAAGCGGCTG
ACCGTGGCCG TGGTGGTGAA TCATAAGCAG GAAGTGGATG CGCAAGGTAA AGTGATCACG
CGCCCGCTGA CCGACGACGA GAAAACCCAG ATCAGCGACC TTGCCAAGCA GGCTATGGGA
TTCAATGAAG AGCGCGGCGA TTCGCTGAGC GTGGTCAACG GCTCTTTCAT GCCGGAGATC
GCGGAAGCAT TCCCTGAGGT GCCGCTATGG AAAGACCCGG ACAATATCGA GATGGCCAAG
GAGTGGCTGA AGAATGGCCT GGTTCTGCTG GTACTGTATA TGCTATACCG CCGCTTCCTG
CGCCCATTGC TGCGCAAGCT CTCGCCGGAA GAAGAAAAGA AGGGCGAACT CGCCGAGCTG
GATGAAGAAG ATCAGGATGC CATCGTCAGC CTCTCCGAGG GGGAAGGTGG CATGACAGGG
GAGGAGGCCG GGGAAGAGGA AGGCGGAGCT CCGGCAGAGC GTACCTATCA GAAGAATCTG
GAATCCGCGC GCAAGCTAGC CAAGGAAAAC CCCAAGGTAG TGGCCAGCAT TGTGACAAAT
TGGGTGAACA GCAATGAGTG A
 
Protein sequence
MAAANEAALA ADTTTEAPAP GSFNFKSLLE NKLLLALGAA AVIALMVVFW LWSQKPEYRV 
LFSSYSDKDG GAIVAALEQM NVPYRIADGG SAILVPANHV HDVRLRLASQ GLPKGGNIGF
ELLENQKFGV SQFVEQVNFQ RGLEGELERT IQSIGAVQAA RIHLAMPKPT VFTRDQQKPT
ASVMLNLHPG RALDQRQVSA IVHLVASSVP ELPTSNVTVV DQNGNLLSDN GKDAGNHYQL
DPTQLKYVDE LQQNIARRVE SIIAPLVGAK NVHAEASAEV DFSMVEQAAE IYKPNQAPDS
AAIRSSQTNE SQTLPGQGVG GVPGALTNQP PAPATAPIVA PGTEPTTTTN ANVVTTTTTT
PPGTTVTTPV MNSERNTTTN YEVDKTIRYQ QQPMGGIKRL TVAVVVNHKQ EVDAQGKVIT
RPLTDDEKTQ ISDLAKQAMG FNEERGDSLS VVNGSFMPEI AEAFPEVPLW KDPDNIEMAK
EWLKNGLVLL VLYMLYRRFL RPLLRKLSPE EEKKGELAEL DEEDQDAIVS LSEGEGGMTG
EEAGEEEGGA PAERTYQKNL ESARKLAKEN PKVVASIVTN WVNSNE