| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1639 |
|---|
| Symbol | |
|---|
| ID | 4000309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | - |
|---|
| Start bp | 1754722 |
|---|
| End bp | 1755633 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637938553 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_545748 |
|---|
| Protein GI | 91775992 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.473605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.315413 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGAT GGATATTGCT GTCAGTGTGT ATCGTGCTCA TGGCACTAGG TCTGCTGTTG
TGGTCTGCCA GCAGGCAAAA GCAGCTCCAG GCAAAAGCCC GTGTTAATTT CGAGCAGGCT
CTGCCTTATT TTGGACAGAT AGAAAACTTG TTGCCTGCTC GGGATAAAAG CTGGGCCTCA
CGTGCCAAGC TGCGTTTCTC GGTCATTTAC GGGTTTGAGC TGGCAGCATG GCATACCGTA
GCCTTTGGAG CAGGGCTATT ACTCCTGTTT GCATTCGCCA ATAGCTATAT GGAGGCATGG
CAGGCTGGAC TGTGCATTGT GGTGCTCACT GCCATTTTCC TGGTGGTCAT TCCTTATATC
CGGTTGCAGC GCCGCCAGCG CATCATCGTC ACACAAATCC CGCTGTTCAT TGACCAGGTA
TCGCGGGCGC TGTCCACTGG CAAGAGTGTG GAAGGAGCCG TGCGCAGTGT CACGGAAGAT
ATGCAGATGC CGTTGCGCGC AGTGCTGGAT CGTGTGGTGC GCGCGACCGA CCTTGGCGCG
GGTTTCGCCG ATGCCATGCA AAAGGCTGCA GAGTTGCACC ATATCAAGGA GCTCGGGTTG
ATTGCCCTGG CAATCCGGAT CAGCAGCAAT TACGGAAGCT CGCCACAGGA GATGCTGAAA
AGCATTGTGC AGATGATACG CCAGCAGGAA CAGGCTCAGC GTGAATTGGC AGCCATGACC
GGAGAAACCA AGATGACCGC CTGGGTATTG TCACTGACTC CCTTGCTGAT CGTGGGCTAT
ATGTTTATAG CTAATCCTGG CTACATCGAC ATGATGTTGA ATGATCCATC CGGCGCATTG
ATATTCAAGG CCGCATTGGC GATGCAGGTT GTTGGCGTCC TGATTTTCTG GCGCATGATG
AAGAGCATCT AG
|
|---|
| Protein sequence | MNRWILLSVC IVLMALGLLL WSASRQKQLQ AKARVNFEQA LPYFGQIENL LPARDKSWAS
RAKLRFSVIY GFELAAWHTV AFGAGLLLLF AFANSYMEAW QAGLCIVVLT AIFLVVIPYI
RLQRRQRIIV TQIPLFIDQV SRALSTGKSV EGAVRSVTED MQMPLRAVLD RVVRATDLGA
GFADAMQKAA ELHHIKELGL IALAIRISSN YGSSPQEMLK SIVQMIRQQE QAQRELAAMT
GETKMTAWVL SLTPLLIVGY MFIANPGYID MMLNDPSGAL IFKAALAMQV VGVLIFWRMM
KSI
|
|---|
| |