| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1626 |
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| Symbol | |
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| ID | 4000120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacillus flagellatus KT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007947 |
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| Strand | - |
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| Start bp | 1739423 |
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| End bp | 1741945 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637938538 |
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| Product | ribonuclease R |
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| Protein accession | YP_545735 |
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| Protein GI | 91775979 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0588631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0102881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAACGA AAAAAAAACA GATTGCAAAA ACAGGTGTAA AAGAAGCCGC TCCTCAGCGC
AAGCTCAAGG GCGGCCGGGC GGGTGACCCT TATGCCGAGC GGGAGCAGGA GAAATATGCC
AACCCTTTAC CTAGCCGGGA ATTTATCTTG TCGGTGATGG AGGAGCAGGG CGTTCCCGTG
ACGGTGGAGG AGCTCTATCG CTTGGTTGGT GTCAAGAAAT CCGAACAGGA AATTTTCTCA
CGCCGCCTGA GGGCGATGGA GCGTGATGGA CAGATTATCC AGAACCGCAA GGGCGCCTTG
TGCATTGCGG AGAAGGTGAA TTTGCTGGCA GGAAGGGTGC AGGGGCATCC TGATGGTTTT
GGCTTCTTCA TTCCCGATGG TGGGGGAGAC GATTTGTTCC TTTCCCCCCG GGAGATGGCC
CAGGTGATGC ATGGGGATCG CGTAATGGTG CGTCCCGCCG GTACCGACAG ACGCGGCAGG
CCGGAGGGGC GGATTGTCGA GGTGCTCGAG CGTGCGACCA AGACATTGGT TGGTCGGGTG
ATCAGCAGTC ACGGGGTGAC CATCGTCGCA GCGGAGGATA AGCGTGTTAA CCAGGATATC
CTGATTCCCT ATCACCTTGA TATGGGGGCG AAGGACGGGC AAGTGGTGAC GGTTGAGCTG
ACCGAGCAGC CATCGATCCA CGCCAAGCCG GTAGGAAAGG TGATCGAGAT ATTGGGCAAT
TATGCCGACC CGGGGATGGA AATCGAAATT GCCCTACGCA AGCATCATTT GCCCCATGAG
TTTTCCGAAG CTGCGATCAA GCAGGCGCAG AAGTACCCTA AGAAGGTACG TGCTGCTGAC
TGGAAGGGGC GCATCGACTT GCGCGAGCTC CCCTTGGTGA CGATTGATGG TGAAACTGCA
CGCGACTTCG ATGATGCCGT CTACTGTGAA CCTCAGGGGA CAGGTTGGCG CCTGGTGGTG
GCGATTGCTG ATGTCAGTTT TTACGTCAGG CCGGGCGACA GTCTCGACAA GGATGCTTAT
GAGCGCGGTA ATTCCGTTTA TTTCCCGCGA CGCGTGATTC CCATGCTTCC CGAGGCATTG
TCCAACGGAC TTTGCTCACT CAATCCCGAT GTGGACAGGC TGTGCATGAT CTGTGACATG
CAGATCAGCA ATACCGGGCG CATTAAGCAA TATAAGTTTT ATCCTTCCGT GATGCGCTCC
AAGGCCAGGA TGACTTATAC CAAGGTCTTC GACATGATCA GCAATCCTGC TGGCGAGGTG
GCCCGCGAGT ACGATTGGCT GATGCCGCAC GTGCAGCATC TATACAGGCT TTACAAAGTC
ATGTTGGCAG CACGCGAGAA ACGTGGGGCG ATCGAGTTCG AAAGCAATGA AACCTTGATG
GTGTTCAACG ATAACGGCAA GATCGAACGT ATCGAAGCGA CTTCCCGTAA TGAGGCGCAC
AGGCTCATCG AGGAGTGTAT GTTGGCTGCC AACGTCTGCG CTGCAAATTT TCTCGACAAG
TGCAAGCACC CTGCCTTATA CCGTGTTCAC GATGGACCTA CCGAAGAAAA GCTGGAAGCC
TTGCGTACCT TCATGGGTGA GTTCGGCTTT ACTCTGGGGG GGGGTGATAC TCCGCATGCC
AAGGACTATG GCAAGCTGCT GGCCCAGATC AAGGGGCGCC CGGATGAGCA GTTGTTGCAG
ACTGTATTGC TGCGTTCCAT GCAGCAAGCT GTCTACAGTC CTGACAATAT TGGCCACTTT
GGTCTGGCTT ATGAGGCATA TACCCATTTC ACTTCGCCAA TCCGCCGTTA TCCCGACCTG
CTGATCCATC GGGCAATCAA GGCGGCCCTG AATGGCGAGG TGTACAAAGC GGGGGATTGG
AATGAGCTTG GCAAGCACTG CTCCATGACC GAGCGGCGTG CCGATGATGC AACGCGGGAC
GTAGAAGCCT GGCTTAAGTG CTACTACATG CAGGACAAGA TTGGTGAGGA GTTTGACGGC
ACGGTAGCGG GTGTGACCAG TTTCGGCCTG TTCGTGGCGC TGGATGGTGT CTACGTGGAA
GGGCTGCTTC ACGTGACTGA GTTGGGTAAT GATTATTTCA ATTACGACAA AGCCCGGCAT
GAAATGCTGG GCGAGCGGAC TGGGGTCAGG TTTCGTCTCG GAGACAGGTT GCGCGTCAAG
GTGAACCGCG TAGACCTTGA AACCAGCCGT ATAGATTTTG GGCTTGTTGC CAGACAGGAC
CAGATGCAGG CATCATCCAC TCCCCCAGCC CCAGCTAATC GCCGTCGTGG GAAGCCTGCC
CCTGCTGCGG CGACAGTAAA AGCTGCGGCA GCGCCTGATG CGGAAAAGCC CAAGCGCCGC
CAGTCTGCCA CTGTCACGTC AACAGAGTTG CCGACCAAGT CCCCGGTGCA GGAGGCAGTG
AAAAAGCCGA GGGCCCGCAG GGCCGATGCG ACCCCGGCGC AGAAAACAAC AAGGACGAGG
CCGCCCCGCG CAAGCGGCGG AAAATCTCGT GCCACAGTGA CAACCAAGAA GAAAGCTAGT
TGA
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| Protein sequence | MSTKKKQIAK TGVKEAAPQR KLKGGRAGDP YAEREQEKYA NPLPSREFIL SVMEEQGVPV
TVEELYRLVG VKKSEQEIFS RRLRAMERDG QIIQNRKGAL CIAEKVNLLA GRVQGHPDGF
GFFIPDGGGD DLFLSPREMA QVMHGDRVMV RPAGTDRRGR PEGRIVEVLE RATKTLVGRV
ISSHGVTIVA AEDKRVNQDI LIPYHLDMGA KDGQVVTVEL TEQPSIHAKP VGKVIEILGN
YADPGMEIEI ALRKHHLPHE FSEAAIKQAQ KYPKKVRAAD WKGRIDLREL PLVTIDGETA
RDFDDAVYCE PQGTGWRLVV AIADVSFYVR PGDSLDKDAY ERGNSVYFPR RVIPMLPEAL
SNGLCSLNPD VDRLCMICDM QISNTGRIKQ YKFYPSVMRS KARMTYTKVF DMISNPAGEV
AREYDWLMPH VQHLYRLYKV MLAAREKRGA IEFESNETLM VFNDNGKIER IEATSRNEAH
RLIEECMLAA NVCAANFLDK CKHPALYRVH DGPTEEKLEA LRTFMGEFGF TLGGGDTPHA
KDYGKLLAQI KGRPDEQLLQ TVLLRSMQQA VYSPDNIGHF GLAYEAYTHF TSPIRRYPDL
LIHRAIKAAL NGEVYKAGDW NELGKHCSMT ERRADDATRD VEAWLKCYYM QDKIGEEFDG
TVAGVTSFGL FVALDGVYVE GLLHVTELGN DYFNYDKARH EMLGERTGVR FRLGDRLRVK
VNRVDLETSR IDFGLVARQD QMQASSTPPA PANRRRGKPA PAAATVKAAA APDAEKPKRR
QSATVTSTEL PTKSPVQEAV KKPRARRADA TPAQKTTRTR PPRASGGKSR ATVTTKKKAS
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