| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1336 |
|---|
| Symbol | |
|---|
| ID | 4000048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | - |
|---|
| Start bp | 1417601 |
|---|
| End bp | 1419562 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637938242 |
|---|
| Product | type II and III secretion system protein |
|---|
| Protein accession | YP_545445 |
|---|
| Protein GI | 91775689 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1450] Type II secretory pathway, component PulD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.474923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACACCA CATCGCACGC AAGCCTGAAA TTCAGCGCGG TATTTATCGC GATCATGCTC
GCCGCCTGCT CCGGCACGGA AATGCGGCAG AACCAGACCA ACCTGGAGTT CCAGCAAGCC
AGGGACATGA TCAACGCCGG ACAGGTCGAG GCCGGGATAG AGCGGCTCAA GAGCCTGGTG
CGCACCTTCC CCGACAATCC GGAATACCGC AACTACCTCA AGCAGCAGCA GGACATTCAG
CTTGCCATCC TGCTCAAGGA GGCGGACCAG CTCAAGCGGC AAAAACGCTG GGGCGAAGCC
GACATCGCCT ACCGGCGCGT GCTCGAGCTC GACAGCCAGA ACCAGCGTGC GCAGAACGGC
ATCCAGCAGA TGCGCATCGC CACCACGCAC GACGCCATGA TGCAGCGCGC CGACGAACTG
CTCGCCAAGC AGGACTGGGA AGGCGCGCAG AACCTGGCGC GCACGGTATT GGCGGAAGAT
TCCAGCAACC GCAGCGCGCG CGCCCTGTTC GAGCAGATCG AGCAGAAACG CATGGACAAG
GTGGTGAACC CGCCTCACAT CCGCTCTTCC TTCAAGCGTC CCATTTCGTT GGAATTCAAG
GATATCACCA TCAAGTCAGT GTTCGAGTTC ATCTCGCAGG CCGCCGCGAT CAACTTCACC
TACGACCAGG AACTGCGCAG CGACCAGCGC ACCAGCGTTT TCCTGCGCAA CACGCCGATC
GAGGAAGCCA TTGATGTCAT CCTCGCGAGC AACCAGCTCG GCAAGAAAGT GCTCAATGAC
AACACCCTGC TGATCTACCC CTTGAGCCGC AGCCAGGAAT ACCAGGAAAC CTTCGTGCGC
AGCTTCTACC TGAGCAACAC CGATGCCAAG AAGCTCATGG CCATGATCAA GACCGTGGTG
AAGACCAAGG ACATCTATAT CGACGAGAAA CTCAACACCT TGGTGATGCG GGATACGCCG
GAAGCGATCC GCACCGCGGA GAAGCTCATC ATGTCGCAAG ACATGGCCGA GCCGGAAGTC
ATGCTCGAGG TCGAGGTGCT GGAAATCAAC CGCCGCAGCC TGGAGAACAT CGGCATCCGC
TATCCCACCA ATGTCAGCCT CGACGTGCAG GGTCGCGATA CCGTCAACGG CACCACCACG
CTCACGCCAG GCAAGCTCAC CATCAACGAG CTCAAGAACT TCAATTCCAA CCTCGGCGTC
TTCAGCATCA GCGACCCAGT GCTGGCACTG AACCTGCTGC AGCAGGACAC CGACACCAAC
CTGCTGGCCA ATCCGCATAT CCGCGTCAAG AACCGCGAAA AGGCCAAGAT CCACGTCGGC
GATCGCATCC CGGTGCTTAC CAGCGTCGCC AACTCCACCG GCTTTATATC GCAGACGGTG
AACTACATCG AGGTAGGGGT CAAACTCGAC GTCGAGCCCA CCATCCTGCT GCGCGATGAG
GTATCGATCA AGATTGGACT GGAAGTCAGC AACCAGACCG ACCGCATGGA GACGAGTTCC
GGCACCGTCA CCTATACCAT AGGCACCCGC AATGCCAGCA CCATCCTGCG ATTGAAGGAT
GGAGAAACAC AAATCCTTGC GGGCCTGATG CGCAACGACG AACAGAAGAT CACAAACGGC
GTGCCGGGGC TTTCCAAACT GCCACTGATC GGCAAACTGT TCAACAACAA TAACAACGAC
CTAAGCAAGA AAGAGATCGC CCTGTTTATC ACGCCACGCA TCATCAGCAA CCTCACCCCG
GAAAATGCCA TCTACACAAC CTTCCCGGCC GGGATAGACC GCAGCGCATC TAGGCCGGGC
CGGGCCGCGG AACCAGGCAC CGTCACCGCG CAAGCCGCAC CTGCTACACC GGTCAAGACC
CCGCAGGAAA TCCAGGCCGA ACGCGCCGAG TCGGACCGTT CCTTTGCCGG ATCGGTCATG
CGTCCGGTGG AAGACATTGC GAGCCCGGAT GAGCAACAAT GA
|
|---|
| Protein sequence | MNTTSHASLK FSAVFIAIML AACSGTEMRQ NQTNLEFQQA RDMINAGQVE AGIERLKSLV
RTFPDNPEYR NYLKQQQDIQ LAILLKEADQ LKRQKRWGEA DIAYRRVLEL DSQNQRAQNG
IQQMRIATTH DAMMQRADEL LAKQDWEGAQ NLARTVLAED SSNRSARALF EQIEQKRMDK
VVNPPHIRSS FKRPISLEFK DITIKSVFEF ISQAAAINFT YDQELRSDQR TSVFLRNTPI
EEAIDVILAS NQLGKKVLND NTLLIYPLSR SQEYQETFVR SFYLSNTDAK KLMAMIKTVV
KTKDIYIDEK LNTLVMRDTP EAIRTAEKLI MSQDMAEPEV MLEVEVLEIN RRSLENIGIR
YPTNVSLDVQ GRDTVNGTTT LTPGKLTINE LKNFNSNLGV FSISDPVLAL NLLQQDTDTN
LLANPHIRVK NREKAKIHVG DRIPVLTSVA NSTGFISQTV NYIEVGVKLD VEPTILLRDE
VSIKIGLEVS NQTDRMETSS GTVTYTIGTR NASTILRLKD GETQILAGLM RNDEQKITNG
VPGLSKLPLI GKLFNNNNND LSKKEIALFI TPRIISNLTP ENAIYTTFPA GIDRSASRPG
RAAEPGTVTA QAAPATPVKT PQEIQAERAE SDRSFAGSVM RPVEDIASPD EQQ
|
|---|
| |