Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mfla_1322 |
Symbol | |
ID | 4000664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacillus flagellatus KT |
Kingdom | Bacteria |
Replicon accession | NC_007947 |
Strand | + |
Start bp | 1404947 |
End bp | 1405927 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637938227 |
Product | pseudouridine synthase, RluD |
Protein accession | YP_545431 |
Protein GI | 91775675 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000381101 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCATT TAAGCAAAAC AAGAAATCAA TATAACCCTG CCGTCGTCAA CCTGCTCACC ATTGATGAAG CTAGTGAAGG CCAGCGTGTT GATAATTTTC TGGCAAAGAT ACTCAAGGGT GTTCCTAAAA GTCATATTTA TCGCATTCTG CGTAGCGGAG AAGTTCGCGT CAACAGTAAG CGCGTGGATT CAAGCTGTAA GCTCAATCTG GGTGACCAGG TGCGCGTGCC GCCGGTGCGT ATGGCGCAGC CGCAAGCCGA ATCGGTCGCA AGGCCGCAGG CTTCCAGGTT TGAGGGCGCC ATTATTTTCG AGGACGAGGC ATTGCTGGTC ATCGACAAGC CGGCTGGGTT CGCCGTGCAC GGCGGCAGCG GCATTAGCCG CGGGGTGATC GAGCAACTGC GCCTGGAACG TCCGCATGCC AAGTTCCTCG AGTTGGTGCA CCGCCTGGAC CGCGAAACCT CCGGCGTGCT GCTGCTCGCC AAGAAACGCG TGGCGCTGGT CAATCTGCAT GACGCCATCC GAAACAACCA GACCGACAAG CGCTACCTGG TGCTGGTGCA TGGCAAATGG ACCGACCAGA AGCGCCGGGT CAAGTTGCCT CTGCATAAAT TCGTACTGCC AAGTGGGGAG CGCAGGGTGG CCGTGCAGGA TGGCGGCCAG AATTCCGACA CTATCTTCTA CCTGCGCAAG CCCTTGGGGG AGTTCACCTT GTTGGAAGCC CAACTTGTCA CCGGTCGTAC CCACCAATTG CGCGTGCAAT TGTCGCACCT GGGTTTCCCG ATTGCCGGTG ATGATAAGTA TGGTGACTTT GCCCTGAACA AATCCTTGCA GAAGCGTGGT TTGAAACGCA TGTTCCTGCA TTCTGCGGAA ACGAATTTAC GACATCCCGT GAGTGGAGAA AAATTGAAAT TGATCGCACC TTTACCTGAT GAGCTTAATA AATTTATTGA AATGCTGAGC GTGGAGTCCA AGCATGGCTA A
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Protein sequence | MIHLSKTRNQ YNPAVVNLLT IDEASEGQRV DNFLAKILKG VPKSHIYRIL RSGEVRVNSK RVDSSCKLNL GDQVRVPPVR MAQPQAESVA RPQASRFEGA IIFEDEALLV IDKPAGFAVH GGSGISRGVI EQLRLERPHA KFLELVHRLD RETSGVLLLA KKRVALVNLH DAIRNNQTDK RYLVLVHGKW TDQKRRVKLP LHKFVLPSGE RRVAVQDGGQ NSDTIFYLRK PLGEFTLLEA QLVTGRTHQL RVQLSHLGFP IAGDDKYGDF ALNKSLQKRG LKRMFLHSAE TNLRHPVSGE KLKLIAPLPD ELNKFIEMLS VESKHG
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