| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1278 |
|---|
| Symbol | |
|---|
| ID | 4000274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | + |
|---|
| Start bp | 1355201 |
|---|
| End bp | 1357114 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637938182 |
|---|
| Product | polysaccharide biosynthesis protein CapD |
|---|
| Protein accession | YP_545387 |
|---|
| Protein GI | 91775631 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000704719 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCATT ATTTCCCCTC ATTCAAGTGG TCGAACTACA TCAGTTTGAA GAATCCACGC
TCTTTGAGCG CTTGGATATA TGACATTGTT GCTGCTGCGC TGGCATGGTG GGCAGCCTTC
CTGTTACGGT TCAATTTTGA TATTCCGGCC AATTTTGTCC AGAGTATGCT CGACAGCGCA
GCATGGGTGA TTCCGCTGCA GGCATTTGTG TTTCTGCTGG CTGGGTTGTA CAAAGGCGTC
TGGCGTTTTG CCAGCCTGCC GGATTTGCAG CGCTTGGTGC GCGCGATTGC GATCAGCGCA
GTGCTTGTGG TTGCGATCTT GTTCATGTTC AAGCCACACG GCATTGTTCC TCGCTCGGTG
CTGATCTTGG ATCCTATGCT GTTGCTGCTG TTGATGGGCG GCAGCCGCTT TGCTTACCGA
GCATGGAAAG AACATCGCCT GTATGGTTCT GCCCAGTTTT CCGGAAAGCC GGTGCTGGTG
CTCGGCGCGG GTGAGGCAGC GATTGCCTTG TTGAAGGATC TTTCCAAAAG CCGTGAATGG
CATGTCGTTG GGTTGCTGGA CGATAAGAAA ACCATGCATG GCCGAGAGCT ACTGGGCGTC
AATGTGCTGG GGTCGATTGC GCAATTGCCA CAGATCGCTG CGGATTTGTC GGTCAATCAT
GTGATTGTGG CCATGCCATC CGCGCGTCAT CAACGACGCA GGGAAATCGT CGAGCTGGCA
AGCAGAAATG GGCTGACTGC GCTCACGGTG CCGTCGTTTG ATGACCTGAT GAGTGGCCAC
CTGAGCATGG CACAGATTCG GCCGGTCGAG GTGGAGGACT TGCTGGGGCG GGAGCCGGTC
AGTCTCGATG GAGAGGGGCT CCAGCATTTG ATCGAGGGGC AGGTGTTGCT GATTACTGGT
GCAGGTGGTT CCATCGGTTC TGAGTTATGC CGCCAGGTGC TGAAATACCG TCCAGCTTGC
CTGGTCTGCC TGGATCAGTC GGAGTACGCG TTGTATCGGT TGGAGCAGGA GTTTGACAAT
CTGGAGTTTG ATACCCGCAT TGAATACGTG GTTGGCGATG TCAGGAACGC ACGCCGGGTG
GGGCAGGTGC TTGGCCGTTA TATGCCCAAA CTGGTGTTCC ATGCTGCTGC GTATAAGCAT
GTGCCTTTGA TGGAGAACCG CAATGTGGCG GAATCATTGT CAAATAATGT CAGCGGTACT
TACACGCTCG CCCAGGCATG CAAAACTGCA GGGGTTGCCA AGTTCGTGCT GATTTCCACC
GATAAGGCGG TTAATCCCAC CAATGTGATG GGGGCCAGCA AGCGCCTGGC GGAAATGATA
TGCCAAGGCC TGCAGGAGGA GTCGGGTACG CGTTTTATCG TGGTGCGCTT TGGCAATGTG
CTGGGCAGTA GTGGCAGTGT AATCCCCAAG TTCCGTGAGC AGATTGCGGC GGGCGGGCCA
ATTACCGTTA CCCATCCCGA GATCACTCGC TATTTCATGT CCATCCCGGA GGCGTGCCAG
CTGGTCATGC AGGCTGGATT GATGGGTGGT GGCGGGGAGA TATTTGTGCT GGATATGGGA
GACCCTGTGC GGATTGTGGA CTTGGCCCGT GATATGATCC GGTTATCCGG GCTTAATGAA
GATGACATTC AGATTGTATA CTCTGGCTTG CGGCCCGGCG AAAAGCTGTA CGAGGAACTT
TTGGCTGACG ACGAGCTCAC TGTACCAACA CCCCACGACA AGCTACGTAT TGCCGTGGCG
CGAAGCGTGG ATGGTGCTTG GGTTCAGGCA TTGCTGAAAT GGATCGACAG GGCATCGCTC
ATAGATGAAT CTGTCATCAA GCAAGAGCTG GGCATGTGGG TGGAGGAGTA TGCAGGGGAT
ATTCATGCCA ATCCATCCAT GATGTTCCCC CCCGAGTCTT CAACCATACA TTAG
|
|---|
| Protein sequence | MLHYFPSFKW SNYISLKNPR SLSAWIYDIV AAALAWWAAF LLRFNFDIPA NFVQSMLDSA
AWVIPLQAFV FLLAGLYKGV WRFASLPDLQ RLVRAIAISA VLVVAILFMF KPHGIVPRSV
LILDPMLLLL LMGGSRFAYR AWKEHRLYGS AQFSGKPVLV LGAGEAAIAL LKDLSKSREW
HVVGLLDDKK TMHGRELLGV NVLGSIAQLP QIAADLSVNH VIVAMPSARH QRRREIVELA
SRNGLTALTV PSFDDLMSGH LSMAQIRPVE VEDLLGREPV SLDGEGLQHL IEGQVLLITG
AGGSIGSELC RQVLKYRPAC LVCLDQSEYA LYRLEQEFDN LEFDTRIEYV VGDVRNARRV
GQVLGRYMPK LVFHAAAYKH VPLMENRNVA ESLSNNVSGT YTLAQACKTA GVAKFVLIST
DKAVNPTNVM GASKRLAEMI CQGLQEESGT RFIVVRFGNV LGSSGSVIPK FREQIAAGGP
ITVTHPEITR YFMSIPEACQ LVMQAGLMGG GGEIFVLDMG DPVRIVDLAR DMIRLSGLNE
DDIQIVYSGL RPGEKLYEEL LADDELTVPT PHDKLRIAVA RSVDGAWVQA LLKWIDRASL
IDESVIKQEL GMWVEEYAGD IHANPSMMFP PESSTIH
|
|---|
| |