Gene Mfla_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1260 
Symbol 
ID4000256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp1336106 
End bp1337827 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content55% 
IMG OID637938164 
ProductTPR repeat-containing protein 
Protein accessionYP_545369 
Protein GI91775613 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID[TIGR02466] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.439457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAG GTATGCAGGT AGCCCGGCAG CCTGGCCAGG GCGAAGTTCA TGCGCTGTTC 
AACTTATATA ATACCGGCCA GCTTCATGAG GCGGAAATGA AAGCGCGTGC ATTGATTAAG
CAATATCCCG GCGCGCTGGT TGTCTACAAC GTGCTGGGCG TGGCGCTTGA GGGGCAGGGC
AAGCTGCAGG AGGCGGTACA GTGCTACCGC AGGGCGCTGG CTTTGAATCC TTCTATTTCA
GAAATGCACT TTAACTTGGG ATCGGTGTTG TCCCAACTTG GACATGAAGA CGAAGCGATC
ACTTCGTACA AGCGTGCTAT CCAGATCAGC CCGGGTCTTG CAGTGGCCCA TTTCAATCTC
GGTACCCTGT TGCAGAAAAA GCAGCTGCTT GAGGAGGCCA TTGCACACTA CCGCCAAGCA
GTCGTGATCG AGCCGGGGTT TTTCGAGGCT TACGGTGCCA TGGGTACGGC CCTGCAGCAG
CAGGGCCACC TGGATGATGC GATTGCATGT TATCGCCAGT CGTTGGCAAT TTCCGACCAT
GCGCTAGGAC ATTTCAACCT GGCCACTGCC TTGCGTGACC GTGGTGCGCT GGAACAGGCG
GTTTCGCACT ACCGGCAGGC TATTGCCTTG CAGCCCAATT ATGCCGATGC GCACAACAAT
CTTGGTGAAG TGTTTCGTGA TCAAGGCGAC ATGGAAAATG CCGTGGCTTG TTATTTGCAA
GCACTGCGCA TGAAGCCAGG GCACCAGGCT GCCTCTTTCA ACATGGCGCA GTTCCTGTAC
GATGCCGGGC GCTTCCTCGA GGCGATCCCT TATTTCGAGG ATTCACGACA AGAGGATTGG
CAGGAAAGAA TACTCTACTG CCTTTATAAA TCGGGGCAGT ATGAAATATT CCGGCGCCGC
TTGCTGCCCC TGCTGGAGGC CAAAGACCAT GTTTCGCCTT TTCTTGCTAC CTTGTCCACG
CATTACGCGA CCAATTTCCG CGTGGAGGAT CACTACCGCT TTTGCCCGAA CCCGATGGAT
TTCGTCTTCC ATCGCAATAT CAAGTCATTG GCGGAGGCGG GCAGCACCTT GCGGGCACAA
CTGCTGGAAG ACATCCAGCT GACTGAAATT GCCGAGCGCA AGCAAGGGCG CCTGCATCAC
GGCATGCAGT CTGCAGGCAA CCTGTTCAAG CGCAAGGAGG AGTCGTTCCG CCAGCTTGCC
GACTTGATTC GCGCTGAAGT ATTGGCTTAT GCGCAGGCGT TCGAGGGCCG GGATTGCGAC
CTCATGCGCC ATTTTCCCGA ACAGGTTGAA TTTGCCAGCT CCTGGTATGT GCGCATGCGC
CAGGGGGGAC ATCTTACATC ACACATCCAT GAAATTGGCT GGCTGAGTGG CTGCGTCTAT
CTCACATTGC CGCAAGCGCT GGAAAACCGA GATGAAGGCT GCATTGAATT CAGCACTCAT
GGCGATGATT ATCCCAGGTT GCACGATGAC TTTCCGGTCC GCGCGATCAG GCCTCATGTG
GGTGATATCG TATTGTTTCC ATCTTCGCTG TTTCACCGTA CCGTGCCGTT CCATTCGGAC
GAAGAGCGTA TCTGCATTGC ATTCGACATC AAGCCGCGGG CATGCTTTTC CCAAGGTGCT
TTGCGCTTGG ACAGCATGAA GGTCATGCTG GTCGCAGGCT TCAACCTGCT TGTGACTGAG
CTTGCAGAAA TTTCAAGCTG GTCGTTGGTG GTGCTGGCCT GA
 
Protein sequence
MKQGMQVARQ PGQGEVHALF NLYNTGQLHE AEMKARALIK QYPGALVVYN VLGVALEGQG 
KLQEAVQCYR RALALNPSIS EMHFNLGSVL SQLGHEDEAI TSYKRAIQIS PGLAVAHFNL
GTLLQKKQLL EEAIAHYRQA VVIEPGFFEA YGAMGTALQQ QGHLDDAIAC YRQSLAISDH
ALGHFNLATA LRDRGALEQA VSHYRQAIAL QPNYADAHNN LGEVFRDQGD MENAVACYLQ
ALRMKPGHQA ASFNMAQFLY DAGRFLEAIP YFEDSRQEDW QERILYCLYK SGQYEIFRRR
LLPLLEAKDH VSPFLATLST HYATNFRVED HYRFCPNPMD FVFHRNIKSL AEAGSTLRAQ
LLEDIQLTEI AERKQGRLHH GMQSAGNLFK RKEESFRQLA DLIRAEVLAY AQAFEGRDCD
LMRHFPEQVE FASSWYVRMR QGGHLTSHIH EIGWLSGCVY LTLPQALENR DEGCIEFSTH
GDDYPRLHDD FPVRAIRPHV GDIVLFPSSL FHRTVPFHSD EERICIAFDI KPRACFSQGA
LRLDSMKVML VAGFNLLVTE LAEISSWSLV VLA