Gene Mfla_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_1253 
Symbol 
ID4000249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp1325102 
End bp1327438 
Gene Length2337 bp 
Protein Length778 aa 
Translation table11 
GC content56% 
IMG OID637938157 
ProductTonB-dependent receptor 
Protein accessionYP_545362 
Protein GI91775606 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.393341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAA GAGAGAATCT GAGGTTGAGT ACGGTTGCAG TGCTGGTTGC CAATGCCTGT 
ATCAGCTTCC AGGCATATGC AGCAGATGCA ACGCCTATCA CTACGGATAA GGTCAATGTG
GTGGGCACGA CGCCGCTGCC TTCGCTCGGT CTGCCATTGG CGCAAGTGCC TGCAGGCATC
CAGCTCATCA CCGGCCCTCA AATGCAAAAG CAGCGCAGCG TCACGATTGC AGACTTTCTG
CAAAACAATG TGCCTGCGGT TAACGTCAAC GATACACAGA ATAATCCTTT CCAGCCCGAT
ATCAGTTTCC GCGGCTATTC GGCCTCCCCA TTGCTCGGTA CGCCCCAGGG CTTGTCCGTT
TATGTGGACG GCGTGCGCGT CAACGAGCCG TTTGGCGATG TCGTGAGCTG GGACCTGATC
CCTGTCAATG CCCTGGCCAA TATGGCCTTG ATTCCGGGTT CCAATCCATT GTTCGGCCTG
AACACGCTTG GCGGAGCCTT GTCCTTGCAG ACCAAGAGCG GCCGCGACAA TCAGGGCGCC
GCTCTGGAGG CCAGTGTCGG CTCATGGGGC CGCAAGGCGG GATCTGTCGA GTATGGTGGT
GTATCGCAGG ACGGTTCGGT CGATTTCTTC ATCACGGCCA ATTCGTTTCG TGAAGATGGC
TGGCGTGACT ACTCCCCGAC CGATGTGCGG CAATTGTTCG CCAAGGTGGG CTGGCAGAAT
GAAACCAGCA AACTGGACCT GAGCTACACC GGCGCCGACA ACGATATGAT CGGCAATGGC
ATGACGCCAT CCGACATGCT GCGCACGCTG GGCCGCGATA CCATCCTCAC TCGACCCGAC
CAGACCCGCA ATACCCTGTC GTTCCTCAAC CTGACCGGTT CGCACTGGTT CAATGACGAC
GTGATGCTGA GTGGCAATGT CTACTACCGC CAATCCAGGA CCCGTACCTT GAATGGGGAT
GGCAATGATG ATGTGGAAGA TGCGGCGATC AGTGCTGTGG GGATTTGCGG CACAGATGCC
AATTGGGGCT TTGAGGATTC CTGTAGTGGC GCCTTGAATC GCAGCAAGGC GCGCAAGGAT
TCTTATGGCT TGACTACCCA GCTCAGCTTC AACCAGGATT GGATGCAAAA GAAAAACCAA
TTGATTGTCG GACTGGGGCT TGATCAAAGC AAGACTCGGT TCGGGCAGTC TTCCGAGCTT
GGCACGCTGA CTTCCAGCCG TGGCGTGTCG GGGATTGGTG AATTCAGTGA TGAGGGGGAA
GTGAGCCTGA CAGGCCGTAC CCGCACCTGG AGCGTGTTCG CTACCGATAC CCTGTCGCTC
AATGATTTCT GGCACCTGAC AATGTCGGCG CGTTACAACC ATACCAAGGT GGAGAATCGT
GATCACCTGG TTGCAAGCGG TGCCGAATCG CTGTCCGGCG ATCACGGCTT CAACCGCATC
AATCCGGCAG TGGGCCTGAA CTTCACGCCC ACCAAGGATT GGACATGGTA TGGCTCGTAT
AACGAGGGCA GCCGTGCGCC AACCGCGATC GAACTAGGTT GTGCCAATCC GGATGTACCT
TGCAAACTGC CCAATGCCAT GGCCGGCGAT CCGCCCTTGC AGCAAGTGGT GGCGAAGACA
TATGAGGCCG GCGTGCGGGG CACGCTGGCG GAAGGCTTAC GCTGGACTGC CAATGTGTAC
CGTGCGCAGA ATGACAACGA TATCCAGTTT ATCTATGCCA ATTCCTCGGG TTACGGCTAT
TTTGACAATG TCGGTAAAAC CCGCCGTATG GGCTTGGATA CGAGCCTGGT AGGCAGCCAG
GGCAATTTCA ACTGGATGCT GGGCTATAGT TACATCAAGG CTACCTATGA GAGCGATATC
AGCCTCGCCA ACGAGGTGAA TACCTCCTCA GACGGCGATA GCATCAATGT CGGCAAAGGC
AGTCGATTGG CCGGCATTCC CGCCCATCGC CTGAAGTTCC GTGGCGAATA CGCCATTACG
CCTCAATGGA GCATAGGCAC CAACGTCCTG GTGTTCTCCG ATCAATATGC CCATGGCAAT
GAGAACAATA AGGACCAAGG AGAAGGTGCG AAGCTGGGCG GTTATACCAT CGTCAATCTG
GATACCCGCT ATCATTTCGG CAATGGCTGG CAATTGTTTG CCAAGGCCGT CAATATCTTC
GATCGTGAAT ATAGTAGTGG CGGCATGATC GGCGAGTCCT ACTTCCTGGC TGACGGCACT
TATGACGGCG GCGAGGATCA CCGGGCGAGC TTGCGTGCCC CAGGTGCTCC GCGCGCAGGG
TGGATTGGTG TGCGCTGGGA TTTTGGTGGC GCCAAGCAAG CGTCTTTCAC CAATTAA
 
Protein sequence
MLKRENLRLS TVAVLVANAC ISFQAYAADA TPITTDKVNV VGTTPLPSLG LPLAQVPAGI 
QLITGPQMQK QRSVTIADFL QNNVPAVNVN DTQNNPFQPD ISFRGYSASP LLGTPQGLSV
YVDGVRVNEP FGDVVSWDLI PVNALANMAL IPGSNPLFGL NTLGGALSLQ TKSGRDNQGA
ALEASVGSWG RKAGSVEYGG VSQDGSVDFF ITANSFREDG WRDYSPTDVR QLFAKVGWQN
ETSKLDLSYT GADNDMIGNG MTPSDMLRTL GRDTILTRPD QTRNTLSFLN LTGSHWFNDD
VMLSGNVYYR QSRTRTLNGD GNDDVEDAAI SAVGICGTDA NWGFEDSCSG ALNRSKARKD
SYGLTTQLSF NQDWMQKKNQ LIVGLGLDQS KTRFGQSSEL GTLTSSRGVS GIGEFSDEGE
VSLTGRTRTW SVFATDTLSL NDFWHLTMSA RYNHTKVENR DHLVASGAES LSGDHGFNRI
NPAVGLNFTP TKDWTWYGSY NEGSRAPTAI ELGCANPDVP CKLPNAMAGD PPLQQVVAKT
YEAGVRGTLA EGLRWTANVY RAQNDNDIQF IYANSSGYGY FDNVGKTRRM GLDTSLVGSQ
GNFNWMLGYS YIKATYESDI SLANEVNTSS DGDSINVGKG SRLAGIPAHR LKFRGEYAIT
PQWSIGTNVL VFSDQYAHGN ENNKDQGEGA KLGGYTIVNL DTRYHFGNGW QLFAKAVNIF
DREYSSGGMI GESYFLADGT YDGGEDHRAS LRAPGAPRAG WIGVRWDFGG AKQASFTN