| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1117 |
|---|
| Symbol | |
|---|
| ID | 4000413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | + |
|---|
| Start bp | 1162812 |
|---|
| End bp | 1163294 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637938017 |
|---|
| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|---|
| Protein accession | YP_545226 |
|---|
| Protein GI | 91775470 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|---|
| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.260705 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGAG TGGGAAACGG GTTTGACGTG CACCAATTGG TGGAAGGGCG GCCATGCATC
ATCGGTGGGG TGGAGATCCC CTTTGCCAAG GGCCTCAAGG GGCATTCAGA CGCGGATGTC
TTGCTGCACG CCGTCAGTGA CGCCTTGCTG GGGGCTGCGG CGCTGGGGGA TATTGGCAAG
CACTTTCCCG ATACCGACGA ACGCTTCAAG GATGCGGACT CCCGGGTATT GCTGCGCCAT
GTCGTGGCCT TGCTCAAGGC CAAGCATTAC AACATCGTGA ATATCGACGC GACCATTATC
GCGGAGGCAC CGAAGATGGC ACCGCACATT GCACGCATGG TGCAGCATAT TGCGGAGGAT
TGCGACATCC TGGCTGATTG CGTGAACGTC AAAGCCACCA CCAGTGAAAA GATGGGGTTT
GTCGGGCGTG GAGAGGGCAT TGCGGCACAG GCCGTTTGCC TGATACAGAA GTACCAGATT
TAG
|
|---|
| Protein sequence | MIRVGNGFDV HQLVEGRPCI IGGVEIPFAK GLKGHSDADV LLHAVSDALL GAAALGDIGK
HFPDTDERFK DADSRVLLRH VVALLKAKHY NIVNIDATII AEAPKMAPHI ARMVQHIAED
CDILADCVNV KATTSEKMGF VGRGEGIAAQ AVCLIQKYQI
|
|---|
| |