| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_1000 |
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| Symbol | |
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| ID | 3999659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacillus flagellatus KT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007947 |
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| Strand | + |
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| Start bp | 1040455 |
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| End bp | 1041072 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637937900 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_545109 |
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| Protein GI | 91775353 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000231343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0259336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGTAA CCCCGCCAGC GGGTAATCGG GAGCTAGACC AGCAGTTAGT TGAGCGCGCA
CAAAGTGGTG ATAAGCGTGC GTTCGGGTTG CTGGTGGATA AGTACCAGCG CAAGCTGGGA
CGATTGCTTT CGCGCTTGAT CAGGGATCCC GCCGAAGTTG AGGATGTCGT CCAGGAATCC
TTCATCAAGG CTTACCGGGC CTTGCCCAGC TTCCGTGGTG ATAGTGCGTT TTATACCTGG
TTGTACCGTA TTGGCATCAA CACTGCGAAG AATTACCTTG TCGCGATGGG ACGCAGACCC
CAGGCCACAG GGGATATCGA GATCGAAGAC GCAGAAAATT TTGATGATGG CAATGAATTG
CGCACCATGG ATACCCCTGA GACGGAATTG ATGGGCAAAG AGATTGCCCA AACTGTGAAC
GACACCGTCG CTATGTTGCC AGAGGAATTA CGTACTGCGA TTACCTTGCG CGAGATAGAA
GGCCTTAGCT ACGAGGAAAT TGCCACCATG ATGGACTGCC CCATAGGGAC GGTACGTTCT
CGTATTTTCC GTGCTCGTGA AACGATTGCC CAGAAGTTGC GTCCTTTATT GGACACCCCC
GAAAACAGGA GATGGTAA
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| Protein sequence | MAVTPPAGNR ELDQQLVERA QSGDKRAFGL LVDKYQRKLG RLLSRLIRDP AEVEDVVQES
FIKAYRALPS FRGDSAFYTW LYRIGINTAK NYLVAMGRRP QATGDIEIED AENFDDGNEL
RTMDTPETEL MGKEIAQTVN DTVAMLPEEL RTAITLREIE GLSYEEIATM MDCPIGTVRS
RIFRARETIA QKLRPLLDTP ENRRW
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