Gene Mfla_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0872 
Symbol 
ID4001023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp910602 
End bp913004 
Gene Length2403 bp 
Protein Length800 aa 
Translation table11 
GC content58% 
IMG OID637937772 
ProductTonB-dependent receptor 
Protein accessionYP_544981 
Protein GI91775225 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00643359 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.114745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGTACA GTACCATGGG CGTCAGCATG CTCGCCCTCA TCGCCACATC CGGCCCCAGC 
CATGCCCATG ATGAATTACC TTTACACTCA ACAGAGCGAA TCCAGAAACT CGAGACCACC
AGCGTAACTG CCAGACGGCG CCTGGAGAAA GAGCAGGACG TCCCTGCCAC CGTATCGGTA
GTCAAAGGCA ATCAGTTGGA AGCCGGCAGG ATTTACCAAT TGCAGGACCT GCCGCAGCTC
ATGCCCAGCC TCACGGCGCA ATTCCTGCAT CCGCGCCAGT CCAGCATCGC CATCCGCGGC
ATAGGCAACA ACCCGGCCAA CGAGGGGCTG GAAGGCAGCG CCGGTATCTA TCTCGACAAC
GTATTCCTCG GCCGCCCCGG CCTGGCCGTG TTCGACCTGC TGGATATCGA GCAGGCCGAA
CTGCTGCGCG GCCCGCAAGG GACACTATTC GGTAAGAACA CCACTGCCGG CGTGCTTAAC
ATCACCACCC GCAAGCCGGT TTTCAAACCG GAATATTCGG CGGAAGCGAG TTACGGGTCG
CGCGACTTTG AGCAATACAA GGTCATGCTC AACCAGCCAA TCAATGAGAT GGCAGCATTG
CGCATTGCCG CCTATAAAAC CCATGATGAC GGCTGGGTAA AGAACACCTA CGACGGCAAG
AACCTCAACG AAATCAACCG TACTGGCGCA CGTGGGCAAC TGCTGCTGCA ACCCAGCGAA
TCGTTTGACC TGCGCCTGAT TGCCGAGCAC AACGAGGAAG ATTCCAGCAC TGGCACCCTG
GTGCCTTATC GGTATGGGCC ATGGACACCC AATGCATTCA TGTTTCTAGG GATACATCCG
GTAACAGGCC AGCCGGTTTT CGGCCCTGAT TATTCCAGTA ACCTGCCTGC TGGCACTCCA
GGTTCCAACG CGACCGACGC CATCACCCAC GCCAACGGCC TGGGTGCATC AAATCGCGCC
TATGACCCCA AGGACTACAA GGTCACATTG GACGGAAGGC AACGTACCCG TACCAGCCAG
GATGCCCTCT CGGCTGAGGC CAACTGGCAT TTCAATGGCT ACACCCTCAC CTCGATCACC
GCCTGGCGGC AATGGCAATT CAAGCCAGAC AACGATCTCG ACCGTACCGA TCTGTTTGCG
GTCAACGGCG GCGTCGATGC CCGCCATAAG CAATACTCGC AAGAAATCCG CCTGGCCTCA
CCCCTGAGCG ATGTATTCGA CTACGTAGCG GGCGTCTACT ACTACTATCA AGACGTTTCC
AACCGCGAGC AGTACATGAC CGGGCCGGAT GCTTTCGCGC TGACCACCAT CTACCCCGAC
AATTCGGCGT TTTCCGGGTC CGGCTACGCC AAGACCCACA GCTATGCGTT ATTCGGACAA
GGCACCTGGC ACCTGTCGGA AAAACTCGAC CTGACCGCAG GCCTGCGCGC CACCATGGAG
AAAAAAGAAG CGCGAGTGGT GCAAGACCAG ATTACCCCGT TGCCACCAAT CCTCTCCCCC
TTGCTTGATC ATTACGATAC CGGCGTGCAA CACCAGAAGG ATGAAAGCCT TTCCAGCCTG
CTGACCGCAA GCTACTGGCT GAATGACCGT GTGCTTGGCT ATGCCACCTA CTCATCCAGC
GAAAAATCCG GCGGCTTCAA CACCAATGGC GTGGCTTCAC CAGGCGCGGT GCTGGGCACC
GAGGCCTTGA ACATTGACCC GGAAAAAGCC AACAATCTCG AATTCGGCAT CAAGTCGAGC
TGGCTGGATC AGCGCTTGGT CGCCAACGCC AGCGTCTTCC TGACCAGGGT CAAGGATTAC
CAGGCCATCA CCGGGACATC GATCAACGGC ACCTATGCAG GACTGCTTAC CAATGTGGGC
GACCTGAGCA GCAAAGGGAT GGAATTGGAT TTGCGTGCCA GGGTCAGCCA GCATCTCAGC
CTCAGCCTGA GCGGGGCCTA CACCGATGCC AGCTTTGACC GCGGCACGGC TCCCACCCCG
GCCGAGGAAT TCAATGGTCC TGGCGGTACC AGTGACAGCG GCTATGGCAA AGGAACGCGC
AGCATTGCAG GCAACCAGGT GAACGGCGCA TCGCGCTGGG CATTCAGTAG CGGCGCCCAC
TTGCGCTGGA ACCCTGCCGA CAACCTTGAA CACTATGCCA ATGCACAATA CAGCTGGCGC
TCCGAAAGCT ATGGCGACGT CAACAACTCG GAATACTCGA AGATTGCCGG ATACGGCATC
CTCAATGTCA GCACCGGCTT GCGGGTAACC AGCGGCAAGC ATCGCTGGGA CTTCTCGCTA
TGGGCTAAGA ATGTATTGGA TAAGCGCTAC TTTCTCGGCC TCACCAACGC AGGCAGCAAC
CTCTATGTCG GTTCGGCCGG CCAGCCGCGT ACGATAGGCG CCAGTCTGCG CTACGATTTC
TAA
 
Protein sequence
MKYSTMGVSM LALIATSGPS HAHDELPLHS TERIQKLETT SVTARRRLEK EQDVPATVSV 
VKGNQLEAGR IYQLQDLPQL MPSLTAQFLH PRQSSIAIRG IGNNPANEGL EGSAGIYLDN
VFLGRPGLAV FDLLDIEQAE LLRGPQGTLF GKNTTAGVLN ITTRKPVFKP EYSAEASYGS
RDFEQYKVML NQPINEMAAL RIAAYKTHDD GWVKNTYDGK NLNEINRTGA RGQLLLQPSE
SFDLRLIAEH NEEDSSTGTL VPYRYGPWTP NAFMFLGIHP VTGQPVFGPD YSSNLPAGTP
GSNATDAITH ANGLGASNRA YDPKDYKVTL DGRQRTRTSQ DALSAEANWH FNGYTLTSIT
AWRQWQFKPD NDLDRTDLFA VNGGVDARHK QYSQEIRLAS PLSDVFDYVA GVYYYYQDVS
NREQYMTGPD AFALTTIYPD NSAFSGSGYA KTHSYALFGQ GTWHLSEKLD LTAGLRATME
KKEARVVQDQ ITPLPPILSP LLDHYDTGVQ HQKDESLSSL LTASYWLNDR VLGYATYSSS
EKSGGFNTNG VASPGAVLGT EALNIDPEKA NNLEFGIKSS WLDQRLVANA SVFLTRVKDY
QAITGTSING TYAGLLTNVG DLSSKGMELD LRARVSQHLS LSLSGAYTDA SFDRGTAPTP
AEEFNGPGGT SDSGYGKGTR SIAGNQVNGA SRWAFSSGAH LRWNPADNLE HYANAQYSWR
SESYGDVNNS EYSKIAGYGI LNVSTGLRVT SGKHRWDFSL WAKNVLDKRY FLGLTNAGSN
LYVGSAGQPR TIGASLRYDF