Gene Mfla_0748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0748 
Symbol 
ID4000492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp783640 
End bp785328 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content60% 
IMG OID637937648 
Product2-isopropylmalate synthase 
Protein accessionYP_544857 
Protein GI91775101 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00970] 2-isopropylmalate synthase, yeast type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.534107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTAA AGAATCCAAG CAGCAAATAC CGCCCGTTTA CCCCGATTGA CTTGCCCAAC 
CGGCAATGGC CGGCCCGCAC CATCACCCAG GCGCCGATCT GGATGAGCAC CGACCTGCGA
GACGGCAACC AAGCCCTGTT CGAGCCCATG AACGCTGAAC GCAAGATGCG CATGTTCAAG
ATGCTGGTTG AAATCGGCTT CAAGGAAATC GAGGTGGCAT TTCCTTCCGC CTCGCAGACC
GATTTCGATT TTGTGCGTAC CTTGATTGAG GAAGAACATA TTCCTGGTGA CGTGACCATC
GAGGTGTTGA CCCAGGCGCG CGAAGACCTG ATCCGCCGCA CGTTCGAATC CTTGCGCGGT
GCAAGGCGGG CGATTGTCCA TGTCTATAAT GCGACTTCCC CTGTGTTCCG CGAGACAGTG
TTTCGCACCG ACAAGGCCGG GGCCAAGAAG ATTGCCACCG ATGCCGCCCG CCTCATCAAG
CAGCTTGCGG ATGAGCGCCC GGAAACCGAA TGGGTGTTCC AATATAGTCC GGAAACCTTT
ACCGCGACCG AGCTCGATTT CGCCAAGGAA GTCTGCGATG CTGTCACGGA CATCTGGCAG
GCCACGCCCG AGCGCAAGGT CATCCTCAAC CTGCCTGCGA CGGTGGAAAT TGGCACACCC
AATTACTACG CTGACCAGAT TGAGTGGATG CACACCAACC TAGCGCGCCG CGACAGTGTG
ATCATCAGCG TGCATCCGCA CAATGACCGC GGTACCGCAG TGGCGGCGGC GGAGTTGGCG
GTAATGGCTG GCGCGGATCG TATCGAAGGC TGCCTCTTCG GGCATGGCGA GCGCACCGGC
AATGTCGATT TGGTAACCTT GGCGCTCAAT CTCTATACGC AGGGTATCGA CCCCCGTCTG
GATTTCTCCC AGATCAACAG CATCGCTCGC ACCGTAGAGG ATTGCACCCA GTTGCCGGTG
CATGCCCGCC ATCCCTATGC GGGCGACCTT GTGTTCACGG CATTTTCCGG TTCGCACCAG
GACGCAATCA AGAAGGGCTT TGCCGTGCAG CAGCCAGGCG ATCTTTGGCA AGTGCCTTAT
CTGCCGATAG ACCCACATGA TGTGGGCCGC ACCTACGACT CCATCATCCG CGTCAACAGC
CAATCGGGTA AAGGCGGCAT CGCCTATTTG CTGGAATCTG GCTATGGCCT CGCCATGCCG
CGCCGCATGC AGGTGGAGTT CAGCGGCGCT GTGCAGCGTC TCACCGATAG CAGCGGGCAG
GAAGTCAGTG CCGAGGGCAT CTGGCAATTG TTCAACGAAG AATATATCGC GGCGGATGAG
CCCGTGCGCT ATATCGACCA TGTGCTCGAC GAGCAGGATG ATGTCCAGCA CATCAAGCTC
ATCGCGCGCA TCCATGGCGT GGAAACCGTG CTCGAAGGCC GCGGCAACGG CCCGATCGAT
GCCCTGGTGC ACGCGTTCGG CAGCAAATTC CGCATCCATG ACTACGAGGA GCGCGCGCTT
GGCGCGGGCG CTGCCGCCAG GGCCGTGGCG TTTGCCGAGC TGGAGAAGGA TGGCCAGCCC
GGTACCGTGT ATGGTGCGGG AATCCACGAC AACCTGGTCA CGGCATCCAT TCTGGCCGTG
ATCAGCGGTA TCAACCGCTT GTACCAGCGC CTTGATGCGG CTGCACAGCA GGCGCTTCTA
CCGCGGTGA
 
Protein sequence
MMLKNPSSKY RPFTPIDLPN RQWPARTITQ APIWMSTDLR DGNQALFEPM NAERKMRMFK 
MLVEIGFKEI EVAFPSASQT DFDFVRTLIE EEHIPGDVTI EVLTQAREDL IRRTFESLRG
ARRAIVHVYN ATSPVFRETV FRTDKAGAKK IATDAARLIK QLADERPETE WVFQYSPETF
TATELDFAKE VCDAVTDIWQ ATPERKVILN LPATVEIGTP NYYADQIEWM HTNLARRDSV
IISVHPHNDR GTAVAAAELA VMAGADRIEG CLFGHGERTG NVDLVTLALN LYTQGIDPRL
DFSQINSIAR TVEDCTQLPV HARHPYAGDL VFTAFSGSHQ DAIKKGFAVQ QPGDLWQVPY
LPIDPHDVGR TYDSIIRVNS QSGKGGIAYL LESGYGLAMP RRMQVEFSGA VQRLTDSSGQ
EVSAEGIWQL FNEEYIAADE PVRYIDHVLD EQDDVQHIKL IARIHGVETV LEGRGNGPID
ALVHAFGSKF RIHDYEERAL GAGAAARAVA FAELEKDGQP GTVYGAGIHD NLVTASILAV
ISGINRLYQR LDAAAQQALL PR