Gene Mfla_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0517 
Symbol 
ID3999190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp538850 
End bp540397 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content56% 
IMG OID637937414 
Product2-isopropylmalate synthase 
Protein accessionYP_544628 
Protein GI91774872 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000128624 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTC AGGCTATGAC CCAGAATCAG CTCATTATTT TCGATACCAC CCTGCGCGAC 
GGCGAACAAA GCCCTGGTGC GGCCATGACT AAGGAAGAGA AGCTGCGCAT TGCCCGTCAA
CTGGAAAAGC TGGGAGTGAA TGTGATCGAG GCCGGGTTTG CTGCGGCAAG CCCAGGGGAT
TTCGGTGCCA TTCGTGCCAT TGCCGAGGCG ATCACCGAAA CCACCGTCTG TTCTCTCGCG
CGTGCCAACG AGAATGATAT TCGCCGCGCA GGAGAAGCCA TCCAGCCGGC AAAGAAGCGA
CGTATTCATA CTTTCATCGC GACGAGCCCA ATCCATATGC AGAACAAGCT GCGCATGACG
CCCGAACAGG TGCTGGATCG TGCCGTGCAG GCAGTGCAGT GGGCGTTGGA ATATACTGAC
GATGTTGAAT TTTCTGCCGA AGATGCAGTG CGCTCCGACA TTGATTTTCT GGTGCAGGTA
TTCGATGCCG TAATCGCGGC AGGTGCCAAG ACCATCAATG TGCCCGATAC CGTAGGGTAT
TCGGTGCCAG GACAATGGGG TGAGCGCATG GCTCAGCTGA TTGCACGGGT AAGGAACTCG
GACAAGGTGA TATGGTCGAC CCATTGCCAT AACGATCTTG GCATGGCGGT GGCGAACTCC
TTGTCTGCTG TGCTGGCTGG TGCGCGACAA GTGGAATGCA CGATCAACGG GTTGGGTGAG
CGTGCAGGCA ATGCCAGCTT GGAAGAGATA GTGATGGCGG TCAAGACGCG TCGTGACGTG
TTCCAGCTCG AAACCACCAT CGACACCACG CAGATCGTGG CGACATCCAA GCTGGTATCG
ACGATCACCG GCTATCCAGT ACAGCCCAAT AAAGCCATTG TGGGCGCGAA TGCATTTGCC
CATGAGTCCG GTATCCACCA GGACGGCGTG CTCAAGCACC GTGAGACCTA TGAGATCATG
CGCGCGGAAG ACGTAGGCTG GGGCGCCAAT AAGTTGACGC TGGGAAAGCT GTCTGGACGT
AATGCTTTTC GTACCCGTCT TACTGAGCTT GGCATTACTC TGGAGAGTGA GGACGCGCTT
AATGCCGCAT TCGCTCGCTT CAAGGAGCTG GCAGACAAGA AATCAGAAAT ATTCGACGAG
GATATACAGG CATTAGTCAG CGATAACGTG GTCAATGAAG AGAACTTCAA GCTGGGATAT
TTGCATGTAG CATCGCAGAC TGGGGAAACT CCCCATGCGG AAGTGGTCGT ACTGGAGAAT
GGCGTCGAGC ACCGGGCAGA TGCTACTGGC GGCGGCCCTG TCGATGCGGC GTTCAAAGCG
ATTGAAAAGA TTGTACGTAG TGGCGCCGAG CTGTTGCTGT ATTCCGTCAA CAATATCACC
AGCGGTACCG ATGCGCAGGG CGAGGTAACG GTGCGCCTGT CCAAGGGGGG GCGTGTGGTG
AATGGGCAGG GGGCCGATAC GGATATCGTT ATTGCCTCGG CCAAGGCGTA CCTGAACGGC
CTCAATAAGT TGCATGCCTA TGCAGAGCGG GCACATCCGC AAGTTTAG
 
Protein sequence
MEFQAMTQNQ LIIFDTTLRD GEQSPGAAMT KEEKLRIARQ LEKLGVNVIE AGFAAASPGD 
FGAIRAIAEA ITETTVCSLA RANENDIRRA GEAIQPAKKR RIHTFIATSP IHMQNKLRMT
PEQVLDRAVQ AVQWALEYTD DVEFSAEDAV RSDIDFLVQV FDAVIAAGAK TINVPDTVGY
SVPGQWGERM AQLIARVRNS DKVIWSTHCH NDLGMAVANS LSAVLAGARQ VECTINGLGE
RAGNASLEEI VMAVKTRRDV FQLETTIDTT QIVATSKLVS TITGYPVQPN KAIVGANAFA
HESGIHQDGV LKHRETYEIM RAEDVGWGAN KLTLGKLSGR NAFRTRLTEL GITLESEDAL
NAAFARFKEL ADKKSEIFDE DIQALVSDNV VNEENFKLGY LHVASQTGET PHAEVVVLEN
GVEHRADATG GGPVDAAFKA IEKIVRSGAE LLLYSVNNIT SGTDAQGEVT VRLSKGGRVV
NGQGADTDIV IASAKAYLNG LNKLHAYAER AHPQV