Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mfla_0517 |
Symbol | |
ID | 3999190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacillus flagellatus KT |
Kingdom | Bacteria |
Replicon accession | NC_007947 |
Strand | + |
Start bp | 538850 |
End bp | 540397 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637937414 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_544628 |
Protein GI | 91774872 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000128624 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATTTC AGGCTATGAC CCAGAATCAG CTCATTATTT TCGATACCAC CCTGCGCGAC GGCGAACAAA GCCCTGGTGC GGCCATGACT AAGGAAGAGA AGCTGCGCAT TGCCCGTCAA CTGGAAAAGC TGGGAGTGAA TGTGATCGAG GCCGGGTTTG CTGCGGCAAG CCCAGGGGAT TTCGGTGCCA TTCGTGCCAT TGCCGAGGCG ATCACCGAAA CCACCGTCTG TTCTCTCGCG CGTGCCAACG AGAATGATAT TCGCCGCGCA GGAGAAGCCA TCCAGCCGGC AAAGAAGCGA CGTATTCATA CTTTCATCGC GACGAGCCCA ATCCATATGC AGAACAAGCT GCGCATGACG CCCGAACAGG TGCTGGATCG TGCCGTGCAG GCAGTGCAGT GGGCGTTGGA ATATACTGAC GATGTTGAAT TTTCTGCCGA AGATGCAGTG CGCTCCGACA TTGATTTTCT GGTGCAGGTA TTCGATGCCG TAATCGCGGC AGGTGCCAAG ACCATCAATG TGCCCGATAC CGTAGGGTAT TCGGTGCCAG GACAATGGGG TGAGCGCATG GCTCAGCTGA TTGCACGGGT AAGGAACTCG GACAAGGTGA TATGGTCGAC CCATTGCCAT AACGATCTTG GCATGGCGGT GGCGAACTCC TTGTCTGCTG TGCTGGCTGG TGCGCGACAA GTGGAATGCA CGATCAACGG GTTGGGTGAG CGTGCAGGCA ATGCCAGCTT GGAAGAGATA GTGATGGCGG TCAAGACGCG TCGTGACGTG TTCCAGCTCG AAACCACCAT CGACACCACG CAGATCGTGG CGACATCCAA GCTGGTATCG ACGATCACCG GCTATCCAGT ACAGCCCAAT AAAGCCATTG TGGGCGCGAA TGCATTTGCC CATGAGTCCG GTATCCACCA GGACGGCGTG CTCAAGCACC GTGAGACCTA TGAGATCATG CGCGCGGAAG ACGTAGGCTG GGGCGCCAAT AAGTTGACGC TGGGAAAGCT GTCTGGACGT AATGCTTTTC GTACCCGTCT TACTGAGCTT GGCATTACTC TGGAGAGTGA GGACGCGCTT AATGCCGCAT TCGCTCGCTT CAAGGAGCTG GCAGACAAGA AATCAGAAAT ATTCGACGAG GATATACAGG CATTAGTCAG CGATAACGTG GTCAATGAAG AGAACTTCAA GCTGGGATAT TTGCATGTAG CATCGCAGAC TGGGGAAACT CCCCATGCGG AAGTGGTCGT ACTGGAGAAT GGCGTCGAGC ACCGGGCAGA TGCTACTGGC GGCGGCCCTG TCGATGCGGC GTTCAAAGCG ATTGAAAAGA TTGTACGTAG TGGCGCCGAG CTGTTGCTGT ATTCCGTCAA CAATATCACC AGCGGTACCG ATGCGCAGGG CGAGGTAACG GTGCGCCTGT CCAAGGGGGG GCGTGTGGTG AATGGGCAGG GGGCCGATAC GGATATCGTT ATTGCCTCGG CCAAGGCGTA CCTGAACGGC CTCAATAAGT TGCATGCCTA TGCAGAGCGG GCACATCCGC AAGTTTAG
|
Protein sequence | MEFQAMTQNQ LIIFDTTLRD GEQSPGAAMT KEEKLRIARQ LEKLGVNVIE AGFAAASPGD FGAIRAIAEA ITETTVCSLA RANENDIRRA GEAIQPAKKR RIHTFIATSP IHMQNKLRMT PEQVLDRAVQ AVQWALEYTD DVEFSAEDAV RSDIDFLVQV FDAVIAAGAK TINVPDTVGY SVPGQWGERM AQLIARVRNS DKVIWSTHCH NDLGMAVANS LSAVLAGARQ VECTINGLGE RAGNASLEEI VMAVKTRRDV FQLETTIDTT QIVATSKLVS TITGYPVQPN KAIVGANAFA HESGIHQDGV LKHRETYEIM RAEDVGWGAN KLTLGKLSGR NAFRTRLTEL GITLESEDAL NAAFARFKEL ADKKSEIFDE DIQALVSDNV VNEENFKLGY LHVASQTGET PHAEVVVLEN GVEHRADATG GGPVDAAFKA IEKIVRSGAE LLLYSVNNIT SGTDAQGEVT VRLSKGGRVV NGQGADTDIV IASAKAYLNG LNKLHAYAER AHPQV
|
| |