Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mfla_0512 |
Symbol | |
ID | 3999185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacillus flagellatus KT |
Kingdom | Bacteria |
Replicon accession | NC_007947 |
Strand | - |
Start bp | 532804 |
End bp | 534633 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637937409 |
Product | protein-export membrane protein SecD |
Protein accession | YP_544623 |
Protein GI | 91774867 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCT ACCCTTTATG GAAGTACCTG ATGGTGCTGG TTGTCGTCCT GCTAGGGCTG CTCTATGCAG CACCTAACCT GTTCGGCGAA TCCCCTGCCG TACAGATCAC GGCAGCCAAG TCCAATATCC AGGTGGATTC GGCGCTGCTG GAAAATACGG AAAACATCCT GAAACAGGAG AACATTCCGT TTGAAGCGCT ATTCCTCGAT GCCACTGGTG TCAAGGTCCG CTTCCCCAGC ACCGATATCC AGTTGCAGGC CAAGGACGCG CTCCAAGCCC GGCTGGGCAA GGATTACGTC ATTGCGCTCA ACCTGCTTTC ACGCTCTCCA GAGTGGCTGC GCAGCATAGG CGCCCGCCCG ATGTACCTGG GCCTGGACCT ACGGGGCGGG GTGCATTTCC TGTTGCAGGT TGATATGAAG TCAGCCCTGG ACCAGGCGGC AGAGCGATAT GTGGGTGATT TCCGTAGCGT ATTGCGTACC GCCCGGATCA ACTACCTCGG TGTTTCACGT GATGGCCAGG CCGTCAACAT CCGCTTTAAG GACACGGCCG AGCTCAGCAA AGCGCAGCGC GTCCTGGAAA AAGAATACCC AGACCTGACT TTCCGCACTT CCAATCGCGG CGAAGACAGC ATCCTGACTG CCGTATTGAG CGAACCAGCG AAAAAACGCA TTCAGGAATT CGCCATCAAG CAAAACATCC AGACCCTGCA CAACCGGATC AACGAATTGG GCGTTGCCGA GCCTGTCATC CAACAGCAGG GCATTGATCG CGTTGTCGTG CAATTACCAG GGGTGCAAGA CACTGCCAAA GCCAAGGAAA TCCTGGGCCG TACTGCCACG CTGGAAATCC GCATGGTGGA CGAAGACAGG AGCAATGCCG TGACCCTGGA AAATGCTTCC AAGGGCCAGG TTCCTTTCGG CACCGAGTTC TACATCGACC GTAACGGCAT CCCCATGCTG GTCAAGAAAA ATGTCGTGCT GACCGGCGAC TACATCACCG ATGCCGGCCC TGGCATGGAT CCCCAAGGCG GCGGCGCCGT GGTACACGTC ACGCTTGACG CCCGTGGCGC ACGCATCTTC AAGCAAGTCA CACGTGAAAA TGTCGGCAAA CGCATGGCGA TCCTGCTGAT TGAAAAAGGC CAGGCAGAAG TGATTACCGC CCCTGTGATC CGCGAAGAAA TTGGCGGTGG CCGCGTACAG ATTTCCGGTA TGGCCAACAC GCAGGAAGCC ACGGATGTGG CATTGCTATT ACGTGCAGGC GCATTGGCGG CACCGATGGA AATCATCGAA GAGCGCACGG TTGGCCCCAG CATGGGTGAA GCCAATATCG AACGCGGTAT GCACTCCACG CTATGGGGCT TTGTGGCGAT TTCCATATTC ATGATTGCCT ACTACATGCT GTTCGGCACG GTATCCGTGC TGGCACTGAG CATCAACCTG ATACTGCTGG TCGCCCTGCT CTCCATGTTG CAAGCCACGC TTACATTGCC AGGGATCGCA GCGGTTGCGT TAACCCTGGG GATGGCGATC GATGCCAACG TGCTGATTAA CGAACGCATT CGCGAGGAAA TGCGTAACGG CAACACGCCG CAAGCTTCCA TTCACGCGGG TTATGAACGT GCATTTGGCA CCATCCTCGA TGCCAACGTC ACCACCATGA TCGCCGGCCT TGCACTGTTC ATGTTCGGCA CCGGTCCAGT CAAGGGATTT GCCGTTGTGC ATGTCCTGGG CATCCTGACG TCGATGTTCT CCGCAGTGCT GGTTTCCCGC GCGGTAATCA ACCTCATTTA CGGCTACCGC CGCAAGATCA GCAAACTTTC CATAGGCTGA
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Protein sequence | MNRYPLWKYL MVLVVVLLGL LYAAPNLFGE SPAVQITAAK SNIQVDSALL ENTENILKQE NIPFEALFLD ATGVKVRFPS TDIQLQAKDA LQARLGKDYV IALNLLSRSP EWLRSIGARP MYLGLDLRGG VHFLLQVDMK SALDQAAERY VGDFRSVLRT ARINYLGVSR DGQAVNIRFK DTAELSKAQR VLEKEYPDLT FRTSNRGEDS ILTAVLSEPA KKRIQEFAIK QNIQTLHNRI NELGVAEPVI QQQGIDRVVV QLPGVQDTAK AKEILGRTAT LEIRMVDEDR SNAVTLENAS KGQVPFGTEF YIDRNGIPML VKKNVVLTGD YITDAGPGMD PQGGGAVVHV TLDARGARIF KQVTRENVGK RMAILLIEKG QAEVITAPVI REEIGGGRVQ ISGMANTQEA TDVALLLRAG ALAAPMEIIE ERTVGPSMGE ANIERGMHST LWGFVAISIF MIAYYMLFGT VSVLALSINL ILLVALLSML QATLTLPGIA AVALTLGMAI DANVLINERI REEMRNGNTP QASIHAGYER AFGTILDANV TTMIAGLALF MFGTGPVKGF AVVHVLGILT SMFSAVLVSR AVINLIYGYR RKISKLSIG
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