Gene Mfla_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0401 
Symbol 
ID4001271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp410677 
End bp411405 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content55% 
IMG OID637937297 
Product20S proteasome, A and B subunits 
Protein accessionYP_544513 
Protein GI91774757 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3484] Predicted proteasome-type protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTATT GTGTAGGCCT GTTACTCGAC CAGGGGCTGG TCATGGCATC CGATACCCGT 
ACCAATGCTG GCGTCGACCA AGTGGCTGTG TTCCCCAAGA TGAGCGTATT TGATGTGCCG
GGTGAACGTG TGATTACCTT GATGACGGCA GGCAATCTTG CCATCACCCA GGCGGTCATC
AATCGCCTGC GGGATGCGCT TGCGCTCAAC GAGGGCGCGA CATTGCACAA TGTCACGAAC
ATGTTTGACG CCGCCCAGCT GGTAGGCGAG CAGTTGCGGG TCGTGTATGA ACTGGACCAC
GAGCACCTGA AAAACCACAA TACCGAGTTC AATGCCAGTA TCTTGCTGGG CGGACAGATC
GGTAGCGAGG CGCCCAGGCT GTTCTCCATC TATGCGGCGG GCAATTTCAT CGAAACCAGC
CGGGAAACCC CTTATTTCCA GATCGGCGAA ACCAAGTACG GCAAGCCCAT CATTGACCGG
GTGATTACGC ATGGAAGCGA CATCATGGAG GCGGTGAAAT GCGTGCTGAT CTCTTTCGAT
TCGACCATCC GCAGCAATAT TTCCGTTGCG GCGCCCATTG ATCTCTTGAT CTACCGTACA
GACAGCTTCC ACGCTGATTG CAAGCAACGC ATCACTGACA GCGATCCTTA CTACACCATG
ATACGCCAGG GGTGGTCGGA TGGATTGCGC CAGGTGTTTT CCGGATTGCC TAATCCCGAC
TGGTGTTGA
 
Protein sequence
MTYCVGLLLD QGLVMASDTR TNAGVDQVAV FPKMSVFDVP GERVITLMTA GNLAITQAVI 
NRLRDALALN EGATLHNVTN MFDAAQLVGE QLRVVYELDH EHLKNHNTEF NASILLGGQI
GSEAPRLFSI YAAGNFIETS RETPYFQIGE TKYGKPIIDR VITHGSDIME AVKCVLISFD
STIRSNISVA APIDLLIYRT DSFHADCKQR ITDSDPYYTM IRQGWSDGLR QVFSGLPNPD
WC