| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_0378 |
|---|
| Symbol | |
|---|
| ID | 3999306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | + |
|---|
| Start bp | 387912 |
|---|
| End bp | 389318 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637937274 |
|---|
| Product | D-alanyl-D-alanine carboxypeptidase PBP3 |
|---|
| Protein accession | YP_544490 |
|---|
| Protein GI | 91774734 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
|---|
| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.24951 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGGT TGCTTCTGGC GAGCCTGTTG CTGGGAATGA GCACGTTGCT TCATGCTGCT
GCCATCCCGG AGCCGGTCAG TGAGCTGCTC AGGAAAAGCG GTATTCCCGC CGAGAATGTC
GCCGTCTATG TGCAGCGCGT CGATCAATCA TCGCCCTTGG TGGATCACCA AAGCGATCGT
CCGATGAAGA CGGCTTCGAC CATGAAGCTG TTGAGCACTT ATGCCGGGCT GGAGCTGCTG
GGGCCGGGCT ATCGCTGGCG TACTCAGGTT TACCATGATG GCAGTCTCGA AGATGGTGTC
TTGCACGGCA ACCTGATCAT TCAGGGGCGC GGCGACCCTT ATCTGCTGGC TGCCGATATG
CGGATGATGC TGGAAAATTT GCGCCTGGCA GGTGTGGAGG ATATTCAGGG AGATATCGTG
CTCGATACCC ACTACTTCGC CCGACGTTTT CACGATACCG CTGAATTCGA TGGTAAGCCG
CATGCGCCCT ACAATGCTGT TCCTAATGCG TTTGCCGTCA ATATCAAGTC TACTTCATTC
CACTTCCTGG TCGAGAGAGG CAAGCTGGCC ATAGAGGCCG ATCCCATCCT GCCGGAAATT
CACATTCATA ACCAAACCAA TCTGGTGCGC GGCGAGTGCG GAGACTGGAA AAGCCGCCTG
AGGTTTGTCG TAGAGCCGAT GGGGAACGAG GTGGCGGTGA CATTCAAGGG AGATTATCCC
TTGGCCTGCG GCAGTAAGAC GCTGGAACTG AATGTGCTTG AAGACGGACC CTATGCCTAT
GGCTTGTTTC GAAGCAATTG GCTTTCGCTA GGGGGCAAGC TCCAGGGAGG GTGGCGCTAT
GGCGTGCTTC CTGAAGATGC AAGGTTGCTG CTCACGCACG ATTCGCTGCC GCTGTCGGAA
ATCATCCGCA CGATTAACAA GTACAGCAAC AATCTCATGG TCAGGCAGCT GTTCCTGACG
ATGGGAGCAG AGCGAGTTTC CAGCCCGGCG ATGGAGGCGG ACGGTGTTCT AGCCGTCAAG
GCATGGCTTG CCAGCAAGGG GCTGCACTTC CCGGAGCTGG TGCTGGAGAA TGGTTCGGGG
CTTTCACGCC ATGAACAGAT AACAGCGAGA CATATGGCGG CTTTCCTGTT GGCGGCGTAT
GCCAGCCCCG TCATGCCGGA ATATCTTTCC GCCCTGCCTA TTCCCTCCGT GGATGGCACC
ATGGCCAATC GCCTGCGCCA CAGCGAGGCC AGGGGAAGCG CGCACCTGAA AACCGGGACG
ATCAACGGCG TGAGCGCCTT GGCAGGCTAT GTGCACGACC GCAGGGGGCG GCGCTGGGTA
GCGGTGATCA TGGTAAACGA CCCCAAGGCC AGCAGTTCGC GTGCTGCTCA GGACGCACTT
ATCGACTGGA TTTATCATCG GCCCTGA
|
|---|
| Protein sequence | MMRLLLASLL LGMSTLLHAA AIPEPVSELL RKSGIPAENV AVYVQRVDQS SPLVDHQSDR
PMKTASTMKL LSTYAGLELL GPGYRWRTQV YHDGSLEDGV LHGNLIIQGR GDPYLLAADM
RMMLENLRLA GVEDIQGDIV LDTHYFARRF HDTAEFDGKP HAPYNAVPNA FAVNIKSTSF
HFLVERGKLA IEADPILPEI HIHNQTNLVR GECGDWKSRL RFVVEPMGNE VAVTFKGDYP
LACGSKTLEL NVLEDGPYAY GLFRSNWLSL GGKLQGGWRY GVLPEDARLL LTHDSLPLSE
IIRTINKYSN NLMVRQLFLT MGAERVSSPA MEADGVLAVK AWLASKGLHF PELVLENGSG
LSRHEQITAR HMAAFLLAAY ASPVMPEYLS ALPIPSVDGT MANRLRHSEA RGSAHLKTGT
INGVSALAGY VHDRRGRRWV AVIMVNDPKA SSSRAAQDAL IDWIYHRP
|
|---|
| |