| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_0272 |
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| Symbol | rpoB |
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| ID | 3999334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacillus flagellatus KT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007947 |
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| Strand | + |
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| Start bp | 274911 |
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| End bp | 279083 |
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| Gene Length | 4173 bp |
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| Protein Length | 1390 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637937168 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_544384 |
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| Protein GI | 91774628 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000261806 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCTATT CCTTTACCGA AAAGAAACGT CTGCGTAAAA GTTTCGCCAA GCGCGAAAGC
GTGCAGGAGG TTCCTTACCT GCTCGCCATG CAATTGGAGT CCTACGCTGC ATTTTTGCAA
GCTGACACCC CCGCCGACAA GCGCACGGAT ACGGGCCTTC AAGCAGCATT CAGTTCGGTC
TTCCCTATTG TCAGTCATTC CGGCAATGCG CGACTGGATT TCGTGAGTTA TAACCTTGGC
CAAGAGCCGT TCGATGTCAA GGAATGCCAG CAGCGTGGCT TGACTTACGC TGCACCTTTG
CGCGTCAAGG TGCGCTTGAC CATCATGGAT AAGGAAGCTT CTAAGCCTAC TGTCAAGGAG
GTGAAGGAGC AGGAAGTCTA TATGGGCGAA TTGCCGCTCA TGACGGAAAA CGGGTCTTTT
GTGATCAACG GCACCGAGCG TGTCATCGTG TCGCAATTAC ACCGCAGCCC TGGCGTATTT
TTTGAACATG ACCGTGGCAA GACCCACAGT TCAGGCAAGC TGCTGTTCTC TGCGCGCATC
ATTCCTTACC GTGGTTCCTG GCTCGATTTT GAATTCGACC CCAAGGATTA TTTGTATTTC
CGTGTTGATC GTCGTCGCAA GATGCCGGTG ACCATACTCC TGAAAGCGCT TGGTTTTACT
CCAGAGCAAA TTCTGGAAAC ATTCTACGAT TTTGACACTT TCCATATCGC CAAAAAGGGT
GTGCAGTTTG AACTGGTGCC CGAACGCCTG CGTGGGGAGG TAGCCAAGTT CGATATTCTG
GATAAAGATG GCAAGGTCAT TGTTGCCAAG GATAAGCGCA TCACCGTCAA GCATATCCGA
GACATGGAAA AATCCGGGAT CAGCAAGATC ACGGTGCCGG AAGAGTTCTT GCTCGGCCGT
TCCTTGGCTG CGGGTATCGT GGATAAGACT ACGGGCGAAA TTATCGCCAA TGCCAACGAC
GAGGTGACTG AGTCGTTGCT GGACAAGCTG CGCGAAGCAG ATGTTAATAA AATCAATACC
TTGTATGCAA ATGATCTCGA TCATGGCGAC TATATATCGC AAACATTGCG TATTGATGAA
ATTCCTGATG AGTACAGTGC ACGCGTGGCT ATCTACCGCA TGATGCGTCC TGGTGAACCT
CCGACGGAAG AGGCTGTGCA GGCGCTGTTC GAAGGATTGT TCTTCAATGA GGATCGATAC
GACCTTTCTG CTGTCGGCCG CATGAAGTTC AACCGCCGCG CTTTCCCCGA GAAGATAGAG
GAGCGTACTG CTGCATGGTT GCGCCGCTTC TATGAGAAAG TTGGCCCGCA AGGTGCCGAA
GGTCCTGGCA CACTGTCCAA CGATGACATT CTGGCTGTAA TCGCTGTATT GATTGAGTTG
CGCAATGGAC GCGGTGAAAT TGATGATATC GACCACTTGG GTAACCGCCG CATCCGCTCT
GTGGGTGAGT TGGCCGAGAA CCAGTTCCGT GCGGGCTTGG TACGTGTAGA GCGGGCAGTC
AAGGAGCGTT TGTCGCAGGC TGAGTCCGAC AACCTGATGC CGCATGATCT GATTAATGCG
AAGCCGGTGT CCAGCGCGAT TCGTGAGTTC TTTGGGTCTT CGCAGCCGTC GCAATTCATG
GATCAGACCA ATCCATTGTC CGAGATCACG CACAAGCGTC GTGTATCCGC ATTGGGTCCA
GGCGGCCTGA CGCGTGAGCG TGCCGGCTTT GAGGTGCGCG ACGTGCATTC CACCCATTAT
GGTCGTGTTT GCCCGATTGA AACGCCCGAA GGTCCGAATA TCGGCCTGAT TAACTCTCTG
GCTCTGTATT CCCGCACCAA CCAGTATGGT TTCTTGGAAA CCCCTTATCG CCGCGTGGCG
GATAACAAGG TTTCCGATCA GATTGATTAT TTGTCTGCGA TCGAGGAAAG TCAGTACATG
ATCGCTCAGG CGAATTCCGA GCTGGATCAG GATGGCAGGT TTAAGGAAGA CTTGGTTTCT
GCGCGTTATC ACAACGAATT CACCATGGCG CAACCAGACC GTGTGCAGTA TATGGATGTG
GCGCCTGGCC AAATCGTATC GGTGGCGGCT TCCCTGATTC CTTTCTTGGA GCATGATGAC
GCCAACCGCG CCTTGATGGG CGCTAACATG CAGCGTCAGG CCGTACCATG TCTGCGTGCA
GAAAAAGCGT TAGTCGGTAC TGGCATTGAG CGTACTGTGG CTGTCGACTC CGGTACTGTA
GTGACTGCCC GTCGTGGCGG CGTGGTTGAT TATGTCGACT CAAGCCGTAT CGTGGTGCGC
GTGCACGATG AAGAAGCTGC CGCAGGTGAA GTGGGCGTCG ATATCTACAA CCTGATCAAG
TATACGCGCT CCAACCAGAA CACCAATATT AACCAGCGTC CGCTGGTCAA TGTCGGTGAC
GTGCTGGCGC GCGGCGATGT GATTGCCGAC GGTGCTTCCA CCGATATGGG TGAGTTGGCG
CTGGGCCAGA ACATGTTGGT TGCCTTCATG CCATGGAATG GCTACAACTT CGAGGATTCG
ATCCTGATTT CCGAGCGTGT CGTGGCCGAT GACCGCTATA CCTCGATCCA TATCGAAGAG
TTGTCGGTGG TTGCCCGTGA TACCAAGCTG GGCGCAGAAG AAATCACGCG GGATATCTCC
AACCTGTCCG AGCGCATGCT TGGGCGACTG GATGAGTCCG GCATTATTTA TATCGGTGCT
GAAGTCGAAG CAGGTGATGT ACTGGTTGGC AAGGTCACCC CGAAGGGCGA AACCCAGCTG
ACACCGGAAG AGAAATTGCT GCGCGCAATC TTCGGTGAAA AAGCATCTGA CGTGAAAGAT
ACTTCGCTGC GCGTACCATC TGGCATGTCC GGTACCGTGA TTGACGTGCA AGTGTTCACG
CGTGAGGGTA TTGAGCGTGA TGCCCGTGCG CAACAAATCA TTGACGACCA GCTAGCGGAT
TACAAGCAGG ATCTGGCTGA CCAGATGCGT ATTGTCGAAG ATGATGCATT TGGCCGGATT
CGCCGCCTGA TTGAAGGCAA GGTTGCGACC GGTGGACCGC AAAAACTGAA GAAGGGCGAG
ACAGTCACCG CTGAGTATCT GGATGGGTTG GCACGCTATG ACTGGTTTGA CATCCGCCTG
AGCGATGAAG ACGTTGCGCG TCAGCTTGAA CAGCTGCGTG ACAGCCTGTC TCAGGCACGG
ATCGAATTTG ACAGTAAGTT TGAAGAAAAG AAGCGCAAGC TGACCCAGGG CGATGAACTG
CCTCCAGGGG TGCAGAAAAT GGTCAAGGTC TATCTTGCCG TCAAGCGTCG TATCCAGCCC
GGCGACAAAA TGGCGGGCCG ACATGGTAAC AAGGGCGTGG TGTCCAAGAT CGTACCGATT
GAGGACATGC CGCACATGGC CGATGGGACG CCTATGGATA TCGTCCTGAA TCCGCTGGGT
GTGCCATCCC GGATGAACAT CGGGCAGATT CTCGAGGTTC ACTTGGGTTG GGCTGCTAAG
GGGTTGGGCA TTCGTATTGG CAATATGCTG CAGGCGCAAG CCAAGGCGGC CGAGCTGCGG
GACTTCCTGG AGCAGGTATA CAACAAGAGC AATGGCAAGT CGGAAGATAT CGCATCATTG
AGCGATGACG AAGTCATCGA CTTGGCAAAG AACCTCAGGA GTGGCGTACC ATTCGCAACC
CCTGTGTTCG ATGGTGCGAC CGAGGCCGAT ATCAAGGCCA TGCTGGATCT GGCATTCCCT
GACGACGATC CGCGTACGCA GCAGTTACAG TTTGCGTCCG GCAAAACCCA GGTAACCTTG
TTCGATGGCC GTACCGGTGA CGCATTCGAG CGTCCGGTGA CAGTAGGTTA CATGCATGTG
CTTAAGCTGC ACCACTTGGT GGATGACAAG ATGCATGCGC GTTCTACAGG GCCTTACTCG
CTGGTTACGC AGCAGCCGTT GGGCGGTAAG GCGCAGTTCG GTGGTCAGCG CTTCGGTGAA
ATGGAAGTCT GGGCGCTGGA AGCCTACGGT GCATCCTATA CCTTGCAGGA AATGCTGACC
GTGAAATCCG ATGACGTGAC TGGTCGTACC AAGGTATACG AAAACATTGT CAAGGGTGAG
CACAAGATAG ACGCTGGCAT GCCAGAGTCC TTCAATGTGT TGGTGAAAGA AATCCGCTCG
CTCGCCATCG ATATTGATCT TGACCGCAAC TAA
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| Protein sequence | MSYSFTEKKR LRKSFAKRES VQEVPYLLAM QLESYAAFLQ ADTPADKRTD TGLQAAFSSV
FPIVSHSGNA RLDFVSYNLG QEPFDVKECQ QRGLTYAAPL RVKVRLTIMD KEASKPTVKE
VKEQEVYMGE LPLMTENGSF VINGTERVIV SQLHRSPGVF FEHDRGKTHS SGKLLFSARI
IPYRGSWLDF EFDPKDYLYF RVDRRRKMPV TILLKALGFT PEQILETFYD FDTFHIAKKG
VQFELVPERL RGEVAKFDIL DKDGKVIVAK DKRITVKHIR DMEKSGISKI TVPEEFLLGR
SLAAGIVDKT TGEIIANAND EVTESLLDKL READVNKINT LYANDLDHGD YISQTLRIDE
IPDEYSARVA IYRMMRPGEP PTEEAVQALF EGLFFNEDRY DLSAVGRMKF NRRAFPEKIE
ERTAAWLRRF YEKVGPQGAE GPGTLSNDDI LAVIAVLIEL RNGRGEIDDI DHLGNRRIRS
VGELAENQFR AGLVRVERAV KERLSQAESD NLMPHDLINA KPVSSAIREF FGSSQPSQFM
DQTNPLSEIT HKRRVSALGP GGLTRERAGF EVRDVHSTHY GRVCPIETPE GPNIGLINSL
ALYSRTNQYG FLETPYRRVA DNKVSDQIDY LSAIEESQYM IAQANSELDQ DGRFKEDLVS
ARYHNEFTMA QPDRVQYMDV APGQIVSVAA SLIPFLEHDD ANRALMGANM QRQAVPCLRA
EKALVGTGIE RTVAVDSGTV VTARRGGVVD YVDSSRIVVR VHDEEAAAGE VGVDIYNLIK
YTRSNQNTNI NQRPLVNVGD VLARGDVIAD GASTDMGELA LGQNMLVAFM PWNGYNFEDS
ILISERVVAD DRYTSIHIEE LSVVARDTKL GAEEITRDIS NLSERMLGRL DESGIIYIGA
EVEAGDVLVG KVTPKGETQL TPEEKLLRAI FGEKASDVKD TSLRVPSGMS GTVIDVQVFT
REGIERDARA QQIIDDQLAD YKQDLADQMR IVEDDAFGRI RRLIEGKVAT GGPQKLKKGE
TVTAEYLDGL ARYDWFDIRL SDEDVARQLE QLRDSLSQAR IEFDSKFEEK KRKLTQGDEL
PPGVQKMVKV YLAVKRRIQP GDKMAGRHGN KGVVSKIVPI EDMPHMADGT PMDIVLNPLG
VPSRMNIGQI LEVHLGWAAK GLGIRIGNML QAQAKAAELR DFLEQVYNKS NGKSEDIASL
SDDEVIDLAK NLRSGVPFAT PVFDGATEAD IKAMLDLAFP DDDPRTQQLQ FASGKTQVTL
FDGRTGDAFE RPVTVGYMHV LKLHHLVDDK MHARSTGPYS LVTQQPLGGK AQFGGQRFGE
MEVWALEAYG ASYTLQEMLT VKSDDVTGRT KVYENIVKGE HKIDAGMPES FNVLVKEIRS
LAIDIDLDRN
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