Gene Mfla_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0217 
Symbol 
ID3999346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp229570 
End bp230160 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content51% 
IMG OID637937108 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_544329 
Protein GI91774573 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.590876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCA CACAAGAACT TTCCAATTTT CTAGCGCAAA TAGAGCGTCG TGCTTTCAAG 
CAGACGGCGT ATGCCGTGCG CGATGATCAT GCAGCGATGG ATATCGTGCA GGATGCCATG
CTCAAGCTGG CGGAAAAGTA TGCTGCTCGA CCTGTGGAAG AATACCCCAT GCTGTTCCAG
CGCATTCTGC AGAACACCAT GAAGGACTAC TGGCGCCGGC AGAAAGTGCG CAACATCTGG
ACGACATTGC TTTCTTCACT TGGCGTCAGC CCGCAGGATG AGGAAGAGCA CGATCCGCTG
GAAACGATGG CTTCCGATCA TGCTTACGAG AATCCTGAGA TGCAGTATGA GCAACAGGAA
ACCATTGCAA TTATCGAAGC CGCGATAAAA AATCTACCAA AGCGTCAACG AGAAGCATTT
ATCCTGCGTT ACTGGGAAGA TATGGATGTG GCTGAAACGG CTGCCGTCAT GGGATGTTCG
GAAGGTAGTG TTAAGACACA TTGTTCACGG GCGGTCCACG CATTGGCTGC AGCCCTAGGA
CAATACGGAT TTGCTAAGGA AATGCTCGAT AGGGCTGGGG ACGAGCAATG A
 
Protein sequence
MASTQELSNF LAQIERRAFK QTAYAVRDDH AAMDIVQDAM LKLAEKYAAR PVEEYPMLFQ 
RILQNTMKDY WRRQKVRNIW TTLLSSLGVS PQDEEEHDPL ETMASDHAYE NPEMQYEQQE
TIAIIEAAIK NLPKRQREAF ILRYWEDMDV AETAAVMGCS EGSVKTHCSR AVHALAAALG
QYGFAKEMLD RAGDEQ