Gene Mfla_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0212 
Symbol 
ID3999126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp224461 
End bp225555 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content57% 
IMG OID637937103 
Productsecretion protein HlyD 
Protein accessionYP_544324 
Protein GI91774568 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.59943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCTT ATCGCTCAAG GGGCCTTGCT TTGCTGGCCT TGTTATCCTT ACTAATCAGT 
GCCTGCGGCA AAAATAATGA AGAGCCCGCA AAACCGGCTG CAATGCCGTT GGTCAGCGTT
ACTACGGTGG AAACAGCCCG ACTGGAAGTC CGCGAGCAAT CCATTGGCAC CTTGGAGGGG
ATCATGGATC CTACGGTCGC CGCGGAAGTG CCAGCGCGCG TATTGAAAAT ACTCGCCCGC
CCCGGCCAGG CGGTCAAAAA AGGCGACGTC ATCGCCCTCC TGGACGCCGA GGATTATGCA
TTGCAGCAAC GCGAGGCTGA GAGCGAAGTA GCGCGACTGG AGGCATTGCT CCTCAACCAG
CAGCGTAATG TGGAACGCAA CCAGAAGCTC GTGGAAAAAA ACTTCATTTC CCAAAACGCC
CTGGACGAGC TGGAAACGCA GAAAATCGCC TTGAAACGCC AGCTCGAGGG CGCAAAATCC
CGTCTTGCCA CCATCACGCA TAACGGCAGC AAAACCCGGC TGCTTTCTCC CATTGATGGC
AAGGTAGAAA AACAGATCGT GTCGCCTGGC GACTACGTCA AGGTAGGCGA TCCCATCCTG
CAGATCATCA GCAACCAGCG GTTGCGCGCC CACCTTCCCT TCCCGGAAAG CCTGGGCAGC
AAGCTCAAGC CTGGCCTCAA GGTCAGATTG AAAACACCGA CCTCGGAAGA AGAGGCAACA
GGTGTATTGC GCGAGTTCAA GCCCGTCATT GGCAGCAATA ACCGCGCCAT CGACGTACTC
GTGGATATTG TCGACCAACC CGGCTGGCAA TCAGGCGCCA GCGTCACGGG CGAGATCATT
CTCGGCGAAT ATCCTGCCGC GCTCGTGGTG CCAGAACAAA GCATCGTGCT GCGTCCTGCC
GGCGAGGTCG TCTACGTGAT CAAGGACAAT GTTGCACATC AGCGCATTGT CAAAACCGGT
ATCTATCAGG ACGGGCGCAT TCAGATCATC GAAGGGCTCG AAGCAGGTGA AACCATCGCC
GTCGATGGCG CAGCCTTCCT CACCGACCAA ACCCGCGTAC AGGTCCAGGC CCATTCGCAG
CGGGATCAGC CATGA
 
Protein sequence
MSAYRSRGLA LLALLSLLIS ACGKNNEEPA KPAAMPLVSV TTVETARLEV REQSIGTLEG 
IMDPTVAAEV PARVLKILAR PGQAVKKGDV IALLDAEDYA LQQREAESEV ARLEALLLNQ
QRNVERNQKL VEKNFISQNA LDELETQKIA LKRQLEGAKS RLATITHNGS KTRLLSPIDG
KVEKQIVSPG DYVKVGDPIL QIISNQRLRA HLPFPESLGS KLKPGLKVRL KTPTSEEEAT
GVLREFKPVI GSNNRAIDVL VDIVDQPGWQ SGASVTGEII LGEYPAALVV PEQSIVLRPA
GEVVYVIKDN VAHQRIVKTG IYQDGRIQII EGLEAGETIA VDGAAFLTDQ TRVQVQAHSQ
RDQP