Gene Mfla_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0198 
Symbol 
ID3999112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp209709 
End bp210584 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content58% 
IMG OID637937089 
Producttyrosine recombinase XerC subunit 
Protein accessionYP_544310 
Protein GI91774554 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0021573 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGTGT TGCAGCGATA TCTGGAGTAT CTGCAATTCG AGCGAGGCTT GAGCCTGCTC 
ACCGTCAAGC ATTATCGGCG CGACCTGGAG CTGTTATTTG ACCTCAAGTC CGGGATGGCG
CTGGATGCGC TGCAACCATC CCACATCCGC CGCTTTATTG CTACCCTTCA TGGCCGGGGG
TTGAGCGGCA AAACGATTGC GCGCCACCTC TCGGGCTGGC GTGGCTTTTT CGATTACCTG
GTCAAGCGCC ACGGCGCAAC CTGCAATCCC TGCCACGACA TGCGCGCCCC CAAATCCCCC
AAGTCCCTGC CCAAGGCATT GGCCATTGAC CAGGCCGTGC AGCTGGTGGA TATGAAAGGT
GAGGACGTAC TCTCGATACG GGACAAGGCT ATCCTGGAAC TTTTCTATTC ATCCGGTTTG
CGGCTTTCAG AGGTCACTGG GTTGAATATC GGGGATTTGA ACTTGCATGA GGGAACGGTA
AAGGTGCTGG GCAAAGGGAG TAAGTCGCGC ATCGTCCCTA TCGGCCGCCA CGCTATCCAG
GCCATGCAGG ATTGGCTGGC GGTGCGCCAG CCTGCAATCT CAAGCGATGA ACAAGCGGTT
TTTCTCAACC GCAACGGCCG GCGCATCAGC GGCCGGGCCA TCCAGTACCG CATCAAGCAA
TGGGCGATCA GGCGAGGCAT TAGCAGCAAT GTGCATCCCC ACATGCTGCG ACACAGCTTT
GCGAGCCATG TACTGCAATC CAGCGGCGAT CTGCGGGCGG TACAGGAAAT GCTGGGCCAT
GCCAATATCA GCACGACTCA GGTATATACG CATCTGGATT TCCAGCACCT TGCCAAGGTG
TATGATGCGG CGCACCCGCG GGCGCGCAAG AAATAA
 
Protein sequence
MDVLQRYLEY LQFERGLSLL TVKHYRRDLE LLFDLKSGMA LDALQPSHIR RFIATLHGRG 
LSGKTIARHL SGWRGFFDYL VKRHGATCNP CHDMRAPKSP KSLPKALAID QAVQLVDMKG
EDVLSIRDKA ILELFYSSGL RLSEVTGLNI GDLNLHEGTV KVLGKGSKSR IVPIGRHAIQ
AMQDWLAVRQ PAISSDEQAV FLNRNGRRIS GRAIQYRIKQ WAIRRGISSN VHPHMLRHSF
ASHVLQSSGD LRAVQEMLGH ANISTTQVYT HLDFQHLAKV YDAAHPRARK K