Gene Mfla_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0078 
Symbol 
ID3999100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp86352 
End bp88016 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content58% 
IMG OID637936968 
Producttype II secretion system protein E 
Protein accessionYP_544190 
Protein GI91774434 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCAGC AGGGGCTGAT CAGCCAGGAC CAGCTGCGTA TCGCCCTCAT GGAGCAGGAG 
CAGAGCAATA TTCCGCTGGG GCGCCAGCTG GTGCGCCTGG GCTTCGTTAC CGAAGCGATG
GTGCGCGATC TGGTGGCGCA TACCATTGGC CAGGAAAGTA TCGATCTTGC CACGGTCGTG
GCCGATGGCG AGGCGCTGAA AATGGTGCAG GAGAGTTTCG CGCGCCGCTA TCATATCCTG
CCGGTGGCAT TCGATGCCAA CACGCGGCAG TTGACTGTGG CAATGTCCGA TATGTTCAAC
GTGGTGGCGC TGGACCAGTT GCGGGCGACT GTGGGCGCCC AGGTGCAGGT CAAGCCTGTG
CTCGCCGCGG AGGCTCAGCT TGAAGACTAT ATTGACCAGT TCTACGGCTA CGAGCTGTCG
GTGGATGGCA TTCTTCGCGA GATCGAGACT GGGGAAATCG ACTACCAGAG CCTGCAGACA
GGCGGGGACG AATATACCCA GCCGGTGGTG CGCTTGGTCG GTGCCCTACT CATGGATGCG
GTGAAGCGCG GAGCATCTGA TATCCACTTC GAACCCGAGT ATGCCTTTCT GCGCATCCGT
TACCGCATTG ATGGTGTGCT GCAGCAAGTG CGCAGTCTGC ACAAGACCTA TTGGCCCGGC
ATTGCCGTGC GCCTCAAGGT CATCAGTGGC ATGGACATTG CCGAGACGCG ATCTCCGCAG
GATGGACGCT TGAACATGAA CCTGTCTGGC AGACCGATCG ATTTCCGTGT TGCCAGCCAT
CCCACCATCC ATGGCGAGAA TATCGTACTG CGGGTGCTCG ACCGCGAAAA GTCGATTATC
CCGCTCGAGC GCATGGGCTT GCGCGATCAG GCGCTGGACG AGTTGAAGCT CATGATGACG
CGGCCGGAGG GCATCGTCAT CGTGACCGGC CCTACCGGCA GCGGCAAGAC CACGACGCTC
TATTCGCTGC TTTCCTTCCT CAATACCGAA GGCGTCAACA TCATGACATT GGAAGACCCG
GTCGAATATC CTGTGACCAT GATGCGCCAG ACCTCGGTGG CGGAAGTGAA TAAAGTCGAC
TTTGCCAACG GCATCCGATC CATCATGCGC CAGGACCCGG ACATTATCCT GGTGGGCGAG
GTGCGGGATG CCGATACTGC CACCATGGCG TTCCGCGCTG CGATGACTGG CCATCAGGTG
TTTACCACGT TGCACACTAA TTCTGCGCTG GGCACGTTTC CGCGCCTGCT TGATATTGGC
ATCTCGCCCG ACATCATGGC TGGTAACATC ATTGGCGTAG TGGCACAGCG CCTGGTGCGT
GTATTGTGCC AGCACTGCAA GGAAGCCTAT TTCCCAAATG ACGAAGAGCG TAAGCTGCTG
GGCAAGAACA TTCGACCGGA TTTGCGAATT CACCGTGCAC CTGGTTGCAA GCAGTGCGGT
TATACCGGCT TTCGCGGGCG CATGGCCATC ATGGAGCTGC TGAGGGTGGA TAGCGAGATG
GATGCGTTGG TGGCGCGTCG TGCGCATTTT GACGAAATGC GCGACCTGGC ATTGCGGAAA
GGATTCGTCA CGCTTGCGGA AGACGGTATC CGGCGCATCA TCGAAGGACA TACCAGCCTT
GCTGAAGTGA TGCGGGTGAT TGATCTCACT AGTCGGGTCA GTTAG
 
Protein sequence
MVQQGLISQD QLRIALMEQE QSNIPLGRQL VRLGFVTEAM VRDLVAHTIG QESIDLATVV 
ADGEALKMVQ ESFARRYHIL PVAFDANTRQ LTVAMSDMFN VVALDQLRAT VGAQVQVKPV
LAAEAQLEDY IDQFYGYELS VDGILREIET GEIDYQSLQT GGDEYTQPVV RLVGALLMDA
VKRGASDIHF EPEYAFLRIR YRIDGVLQQV RSLHKTYWPG IAVRLKVISG MDIAETRSPQ
DGRLNMNLSG RPIDFRVASH PTIHGENIVL RVLDREKSII PLERMGLRDQ ALDELKLMMT
RPEGIVIVTG PTGSGKTTTL YSLLSFLNTE GVNIMTLEDP VEYPVTMMRQ TSVAEVNKVD
FANGIRSIMR QDPDIILVGE VRDADTATMA FRAAMTGHQV FTTLHTNSAL GTFPRLLDIG
ISPDIMAGNI IGVVAQRLVR VLCQHCKEAY FPNDEERKLL GKNIRPDLRI HRAPGCKQCG
YTGFRGRMAI MELLRVDSEM DALVARRAHF DEMRDLALRK GFVTLAEDGI RRIIEGHTSL
AEVMRVIDLT SRVS