| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mfla_0066 |
|---|
| Symbol | nusA |
|---|
| ID | 3999049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacillus flagellatus KT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007947 |
|---|
| Strand | + |
|---|
| Start bp | 70023 |
|---|
| End bp | 71489 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637936953 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_544178 |
|---|
| Protein GI | 91774422 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000185989 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCG AAATATTGTT ATTGGTCGAT GCGTTGGCCC ATGAGAAGAA TGTGGCCAAA
ACCGTTATTT TTACGGCATT GGAGCTGGCT CTGGCCTCTG CTACCAAAAA ACGTTTTACT
GAAGATGCTG ATGTTCGTGT GGAAATTGAT CGCGACAGTG GAGAGTATCG TTCTTTCCGC
CGTTGGCAGG TGGTCGAGGC AGATGCGTTG GAAAATCCTG CCGCACAGAT TGCGGTGGAT
GATGCACGTG CCGAGGGATT TGCCGTAGGC GACTATATTG AAGAGCCTCT AGAGTCAGTG
GAGTTTGGGC GTATTGGGGC CCAGGCTGCC AAGCAGGTTA TTCTGCAAAA GGTGCGTGAG
GCCGAGCGAG AGCAGATTCT GGATGATTTT TTAGCGCGCA AGGAACATTT GGTGACAGGA
GTCATCAAGC GCATGGAAAA AGGCAACGCT ATCATTGAGG TTGGTCGTCT TGAGTCTGTG
CTGCCTCGTG AGCAAATGAT CCCTAAGGAA AACTTGCGGG TCGGCGATCG TGTGCGTGCC
TATCTTTCTC GTATTGAGCG TAGTGGGCGT GGCCCACAAC TCATTCTTTC CCGTGTGGCG
CCTGAATTCT TGATTAAGCT GTTCGAGCTC GAAGTGCCGG AGATTGAAGA GGGCTTGCTG
GAGATTAAGT CGGCTGCGCG CGATCCAGGC TTACGATCCA AGATTGCAGT GAAGTCGAAT
GACCAGCGAT TGGACCCAGT CGGGACTTGT GTGGGCATGC GTGGTTCGCG TGTGCAGGCT
GTGACAGGAG AGTTGGCAGG TGAGCGTGTC GATATCGTCT TGTGGTCCAT GGATCCTGCC
CAGTTCGTCA TCAATGCGAT GGCTCCCGCA GAAGTGTCCG GCATTGTGGT GGATGAAGAC
GCGCACAGCA TGGATGTCAT CGTCGATGAA GAGCAATTGG CCCAGGCGAT CGGTCGCAAC
GGGCAGAATG TGCGCCTTGC TTCGGAGCTG ACGGGTTGGA CATTAAATAT CCTCACTGAG
GAAGAGGCTG CTAAAAAGAG CGAGGAAGAA CATAGCAGCA TCTTGCAGCT TTTTGTCGAG
AAGCTGGATG TCGATGAAGA GGTTGCTGAT ATCCTGGTGC AGGAAGGATT CAGTACCCTG
GAAGAAATCG CCTATGTGCC TTTGGCTGAA ATGAGCGAGA TCGAGGCTTT CGATGAAGAT
ACTATCAATG AATTGCGCAA GCGTGCCCGC GCTGCCTTGT TGACCGAAGC GATTGCCAAG
GAAGAGAAGG CCGGAGAAGC TTCTGAGGAT TTGCTGCATA TGGAAGGCAT GGACGAAGCG
ACTGCGCGGA CTCTGGCTGG TAAAGGTGTA GCCACAATGG ATGATTTGGC AGACCTTGCC
GTAGATGACT TGGTTGAATT GACAGGCATG GATGTAGAGC GCGCCAAGCA ATTGATCATG
ACGGCGCGTG CCCCCTGGTT TGCTTGA
|
|---|
| Protein sequence | MSREILLLVD ALAHEKNVAK TVIFTALELA LASATKKRFT EDADVRVEID RDSGEYRSFR
RWQVVEADAL ENPAAQIAVD DARAEGFAVG DYIEEPLESV EFGRIGAQAA KQVILQKVRE
AEREQILDDF LARKEHLVTG VIKRMEKGNA IIEVGRLESV LPREQMIPKE NLRVGDRVRA
YLSRIERSGR GPQLILSRVA PEFLIKLFEL EVPEIEEGLL EIKSAARDPG LRSKIAVKSN
DQRLDPVGTC VGMRGSRVQA VTGELAGERV DIVLWSMDPA QFVINAMAPA EVSGIVVDED
AHSMDVIVDE EQLAQAIGRN GQNVRLASEL TGWTLNILTE EEAAKKSEEE HSSILQLFVE
KLDVDEEVAD ILVQEGFSTL EEIAYVPLAE MSEIEAFDED TINELRKRAR AALLTEAIAK
EEKAGEASED LLHMEGMDEA TARTLAGKGV ATMDDLADLA VDDLVELTGM DVERAKQLIM
TARAPWFA
|
|---|
| |