Gene Mfla_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0040 
Symbol 
ID3999457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp40461 
End bp41615 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content59% 
IMG OID637936922 
Productcoproporphyrinogen III oxidase, anaerobic 
Protein accessionYP_544152 
Protein GI91774396 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCCT CGGCGCCAAC CCAGCCCCCG CCGTTGTCGC TTTACATCCA TATCCCATGG 
TGTGTGCGCA AGTGCCCTTA TTGCGATTTC AATTCGCACG AGTCGCGCAC CGAGATTCCA
GAAGCAGCCT ATGTCGATGC GTTGATTGCA GACCTAGAGC AGTCGGTACC ACGCATCTGG
GGACGTCGCG TGCACAGTAT TTTCTTCGGC GGCGGCACAC CCAGCCTGTT CTCGCCCAAG
GCGATCGACC GCATCCTCAG CAATGTGCGG GCTCTCGTGC CCTTGAGCGT GGATTGCGAG
GTCACGCTGG AAGCCAATCC GGGCACCGTG GATGCCGCCC ATTTCCGCGG ATACCGCGCG
GCAGGCGTCA ACCGGCTCTC GCTTGGCATT CAGAGTTTCG ACAGTACCTA TCTGCAGAAA
CTCGGGCGCA TCCATGATGA GGCACAGGCC ATGGCCGCTG CCGATCTCGC TCTGCAGACC
TTTGATTCCG TCAACCTGGA CGTCATGTAC GCATTGCCCG GACAACACCT GGAACATGCC
CTGGCCGACG CGCAACGCGC CTGCAGCCTC CAACCCGCAC ACCTGTCGTT CTACCATCTG
ACGCTGGAAC CCAATACGCC GTTTCACCGT ACTCCGCCTG CATTGCCGGA CGACGACACC
AGTGCCGCCA TGCAGGAAGC GATAGAAGAC CTGCTGGGCC GGCATGGCTA CGAGCATTAC
GAAACCTCGG CGTTTGCGCA ACATGGCAAG CAGTGCCGCC ACAACCGCAA TTATTGGCTG
TTCGGCGATT ACCTGGGCAT CGGGGCCGGC GCACATAGCA AACTGAGCTT CCATGACCGC
ATCACGCGCG AAAGCCGCCA CAAACATCCC AAACGCTACC TGGAACATGC CAGCCGAGGC
AATGCCGTGG AGCACCAATG GCAGATTGCC AGGCATGAAC TGCCCTTCGA GTTCATGATG
AACGCCTTGC GGCTCACCGG CGGCTTTGCA CCCGCACTTT TCGAGCTACG CACCGGCCTG
CCGCTGGAAA GCATTGCCCA TACGCTGCAA CATGCTGTTC AAAAAGGGTT ATTGGACGTA
GGCCAGGAGC GCATTGCCCC CACATTGCTG GGACAACGCT TCCTGAATGA ACTGCTGCAA
CTGTTCCTGG ATTGA
 
Protein sequence
MLASAPTQPP PLSLYIHIPW CVRKCPYCDF NSHESRTEIP EAAYVDALIA DLEQSVPRIW 
GRRVHSIFFG GGTPSLFSPK AIDRILSNVR ALVPLSVDCE VTLEANPGTV DAAHFRGYRA
AGVNRLSLGI QSFDSTYLQK LGRIHDEAQA MAAADLALQT FDSVNLDVMY ALPGQHLEHA
LADAQRACSL QPAHLSFYHL TLEPNTPFHR TPPALPDDDT SAAMQEAIED LLGRHGYEHY
ETSAFAQHGK QCRHNRNYWL FGDYLGIGAG AHSKLSFHDR ITRESRHKHP KRYLEHASRG
NAVEHQWQIA RHELPFEFMM NALRLTGGFA PALFELRTGL PLESIAHTLQ HAVQKGLLDV
GQERIAPTLL GQRFLNELLQ LFLD