Gene Mfla_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMfla_0039 
Symbol 
ID3999456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacillus flagellatus KT 
KingdomBacteria 
Replicon accessionNC_007947 
Strand
Start bp38751 
End bp40316 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content55% 
IMG OID637936921 
Productdiguanylate cyclase 
Protein accessionYP_544151 
Protein GI91774395 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAAC ATAAAAAGTC AGTTGAAACT GCACGACAAA CCCTTATTCA GCTTGCCAAG 
AGCCGGATAG CGCCAACACC CGATAATTAT CGCAAAGTCT ATTATGCCAT TGATGGCCGG
GCTGCCACGG AAGATAGCGC AGTGGCCATA GGCCGGCTAT TGAGCAACGT GCTCAAGGAA
GTTGGCATAC AGCATCCCCC CTACGGCACT CGCATCAACC ACATCCTCAA CCTCCTTGAA
ACAGAGGATT GGAACCGCCT GGAAACTGCG CTGCTGCAGC TGCTGACAGA TTTGTCCAGA
CACGTCGCAC CGGCCGCCGC CACAACACAA GACAGGGCTG GCCTCGTGAC GCTCTGGCGC
AACATGCTGA TCAGGACGCT AGACCTGGTA GTCATACCCC AACTACAGGA AGTCCCCGAT
GCCCAGGCGC GTGCAAACGC CTTGCTGCAA GAAGCACAGC TGGCGCAAAG CCGAGAAGAC
ATCCTGGCCT TGGAAACCGC ATTGAAAAAC ATCCTGTTTA GCCTGGAAAT GCACTTGGAT
ACCCAGAGCC AGCTGCAATT ACGGCTGCTG CATCTGCTGC GACTGCTGGT CGTGAGCATG
GAGGCCTTGG TGCTGGAAGA ACAATGGCTT CAGGGCCCGA CGGCGGCAGT GCGCGAAATT
CTGACCCAGC CATTGAATCT GGACTCATTG TCAAAGGCTG AGGATACGCT GAAAGACCTC
ATCTTCATGC AGGGCCAATT ACGGCCGGGG CTGATCGAGG CCAAGAAGAC ACTGAAGAAA
ATGGCAGAGA TATTCGTGGC ACAATTGGCG GAAATTACCC TGGCAACAGA CGATTACCAA
AGCAAGCTGA ATGGCTATCG CGATGAAATC AGCCATAGTG ACGAAATACA GGACCTCAAC
CATGTATTAA GCCGCCTGCT TGAAGATACC CAGGTCATCA GCAGCATGAC ACAACACTCC
CGCAACAAGA TCATGGAGGC GGAAAGCAAA GTAAGGGAAG CAGAAAAGCA AATCTACGAA
CTGACCCTGC AACTAGACCG CATCAATGAA ATCGCGCATG AGGATTACCT GACCGGCACC
TTGAACCGCC GCGGGATGGA TGAGGCACTG GTGAGGGAAC TCAACCGGGC TGACCGGTTC
GGCATGCCGC TCAGCATCGC CATGATGGAT ATCGACCATT TCAAGCAGAT TAATGACAAT
CTTGGCCATG CCACCGGCGA CCAGGCCCTG GCGCACCTTG CCTCGGTCAT CAAGGAGTCG
CTGCGCACAA CGGATGTGAT CGCACGCTAT GGCGGCGAAG AGTTCATCAT TCTCCTGCCC
GGCACTGCGG AGCAGGACGC AATCAGTGTC ATTATGCGCG CGCAACGGGA GCTGACACGG
AAAATTTTCC TGCACAATGA CAGCCATATC CTCATCACTT TCAGCGCTGG TGTCGCCGAG
CGCAAGGCAG GTGAACCGGC CGACGCCATC ATCGGACGTA CAGACCAGGC CTTGTACCGG
GCAAAAAACA GTGGGCGCAA CCGGGTGGTG GGCGCCAGCA TGCTTGATCA GGCGACGGAA
CAGTAG
 
Protein sequence
MDQHKKSVET ARQTLIQLAK SRIAPTPDNY RKVYYAIDGR AATEDSAVAI GRLLSNVLKE 
VGIQHPPYGT RINHILNLLE TEDWNRLETA LLQLLTDLSR HVAPAAATTQ DRAGLVTLWR
NMLIRTLDLV VIPQLQEVPD AQARANALLQ EAQLAQSRED ILALETALKN ILFSLEMHLD
TQSQLQLRLL HLLRLLVVSM EALVLEEQWL QGPTAAVREI LTQPLNLDSL SKAEDTLKDL
IFMQGQLRPG LIEAKKTLKK MAEIFVAQLA EITLATDDYQ SKLNGYRDEI SHSDEIQDLN
HVLSRLLEDT QVISSMTQHS RNKIMEAESK VREAEKQIYE LTLQLDRINE IAHEDYLTGT
LNRRGMDEAL VRELNRADRF GMPLSIAMMD IDHFKQINDN LGHATGDQAL AHLASVIKES
LRTTDVIARY GGEEFIILLP GTAEQDAISV IMRAQRELTR KIFLHNDSHI LITFSAGVAE
RKAGEPADAI IGRTDQALYR AKNSGRNRVV GASMLDQATE Q