Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4940 |
Symbol | |
ID | 3973857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5510725 |
End bp | 5511468 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637928053 |
Product | polysaccharide export protein |
Protein accession | YP_534781 |
Protein GI | 90426411 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.89418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGCGT TTCGATTGTC GATGGTCGCT GTGATTGCCG CGCTGGCTCT AACCGGCTGC GTGCACAATT CTGGCCCGGT GGCCACGGCA CAGCCGCGCT CCGATCTCGA TGCGATGGCT TACGGACAGG CCCCGACGCC GGCGCCGGTC GGGCGCGGCC TGTTCACCTC GGCTTCGAAT TCCGGCGGCG CGCTGGCAGC GCTCGGTTCG AGTTCTTCAT CCTCGCCGCG GCGGGCTTAC GCCGCGATGC CGGCGGCCTA TGCGCCGGCG CCCGCCGCTT ACGATCCCGA CTACCGGCTC GATGCCGGCG ACCGGCTGCG CATCGTGGTC TATGGCCAGG AAGGTCTCAC CAACACCTAC GCGATCGACG CCGGCGGCGC GATCACCATG CCGCTGATCG GCGCGGTGCC GGCGCGCGGC CGCACCCCCG CGGGGCTTGC CGCCGACGTC ACCGCGCGGC TGCGCAACGG CTTCATCCGC GAACCCTCGG TGGCGGTGGA AATCGAATCC TACCGGCCGT TCTTCATTCT CGGCGAAGTC GCGGCCCCCG GCGCCTATCC TTACGTGCCC AACATGAGCG TCGAGAGCGC GGTGGCGGTG GCTGGCGGGT TTTCGCCGCG CGCCCGCCGC GATCAGGTTA TCCTCACCCA TGGCGACGCC CGCGGCATGG TCCGCGCCGC GGTGCCGCTC GGCACCCCGC TCGGCCCCGG CGATACCGTG CTGGTCGGCG AACGTTGGTT CTGA
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Protein sequence | MRAFRLSMVA VIAALALTGC VHNSGPVATA QPRSDLDAMA YGQAPTPAPV GRGLFTSASN SGGALAALGS SSSSSPRRAY AAMPAAYAPA PAAYDPDYRL DAGDRLRIVV YGQEGLTNTY AIDAGGAITM PLIGAVPARG RTPAGLAADV TARLRNGFIR EPSVAVEIES YRPFFILGEV AAPGAYPYVP NMSVESAVAV AGGFSPRARR DQVILTHGDA RGMVRAAVPL GTPLGPGDTV LVGERWF
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