| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4938 |
|---|
| Symbol | |
|---|
| ID | 3973855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 5508909 |
|---|
| End bp | 5510009 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637928051 |
|---|
| Product | response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase |
|---|
| Protein accession | YP_534779 |
|---|
| Protein GI | 90426409 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.668981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC TCGCCAAACA ACTTCCCGCG AAACGCCGGC TGCTGCTGGC GTCGGATCGC
ACCGATCGCA GCTGTGAACT GGCGCGCATT CTGGGCAACG TCGCCGAGGT CGAAACCATT
CCGACGTCGA ACCTGCCCGA TGCGCCGGCC AAGGATTTGT CGGGCGTCGT CGTTGATATC
AACCTGCGCT CGCCGGAGAC CGTGCAACTG GTTCGTCGCA AGCTGTTGGG CTCGGCCTAT
CAACCGATGC CGCGGCTATT CGTGCTCGCC GATCTGTTGC ACCACGGCGC GATGCAAGCC
TGGGCGCTCG GCGCTACCGA TACCATCGCG CGCCCCTTCG ACCCCGACGA CATTCTGCAG
CGGATTCACG CTGCCTTCCC CCGCGATGAC GACGGCACCG TCGAAACCGA ATCCAAAGGC
AAGGCGCTGA GCGAGGGCGT CGCCGCCGCG CATGCGGTGA TGGTCAAGAT TTTCGAAAAG
CTGCCAGCGG GGATTCCTCT GACGCTCGGT GACGTGATCA AGGCGGAAAA CCACATCCTG
CGCGCGATCA GGCGCACCTC GCTGCGCGAA TGGCTGTCCG CGGTCGGCCG TCACCACAAC
GAGAGCTACC GGCACTGCCT GTTCGCCACC GGCTTTGCGG TGGCCTTCGC ACAGTATCTC
GGCATCCGCG AGGACGACCA GCGACGTTTG ACCCGGGCCG CGCTGTTGTA CGACGTCGGC
AAGGCGTTCG TGCCGCCGGC GATTCTCGAC AATCCGGATC GTCTCAGCTT GGGCCAGCAC
GGCATCTATT GCCAGCATCC GCGGCTGGGC TACGACGCGC TGGCCGCGCA AGGCGGATTT
CCCCGCGAAA TGCTCGATGT CGTGCTGCAC CATCACGAAA TGCTCGACGG CTCTGGCTAT
CCGGACGCGC TGCACGGCGA TCAAATCAGC GATCTGGTGC GCGTCACCAC GCTGGTCGAC
ACGTTCACCA CCTTGGTGGC CAGGCAGCCG AAGGAAACCG TGCACAGCCA CGCCGCGGCT
TTCGCCGCGA TGGAAGCGAT GGGCGACGCG CTCGACCAAC GCCTGGTGCA GGCGTTCCGC
CCGGTGGCGT TGGGCGGCTA G
|
|---|
| Protein sequence | MTALAKQLPA KRRLLLASDR TDRSCELARI LGNVAEVETI PTSNLPDAPA KDLSGVVVDI
NLRSPETVQL VRRKLLGSAY QPMPRLFVLA DLLHHGAMQA WALGATDTIA RPFDPDDILQ
RIHAAFPRDD DGTVETESKG KALSEGVAAA HAVMVKIFEK LPAGIPLTLG DVIKAENHIL
RAIRRTSLRE WLSAVGRHHN ESYRHCLFAT GFAVAFAQYL GIREDDQRRL TRAALLYDVG
KAFVPPAILD NPDRLSLGQH GIYCQHPRLG YDALAAQGGF PREMLDVVLH HHEMLDGSGY
PDALHGDQIS DLVRVTTLVD TFTTLVARQP KETVHSHAAA FAAMEAMGDA LDQRLVQAFR
PVALGG
|
|---|
| |