Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4937 |
Symbol | |
ID | 3973854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5507839 |
End bp | 5508714 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637928050 |
Product | 5'-methylthioadenosine phosphorylase |
Protein accession | YP_534778 |
Protein GI | 90426408 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0005] Purine nucleoside phosphorylase |
TIGRFAM ID | [TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.456105 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGG CCGTTCTTGG CATCATCGGC GGATCCGGGA TTTACGATCT GCCCGGGCTG GAAGACGTTC GCGACGAGGC GATTGCCAGC CCGTGGGGCG AGCCGTCGTC CTCGGTGCGG CGCGGCAGCA TCAGTGGGCT GCCGATCGTG TTCCTGCCGC GCCACGACAA GGGCCACCGG CTGTCGCCCT CCGACATCAA CTACCGCGCC AATATCGACG TGCTGAAGCG CGCCGGCGTC ACCGACCTGA TTTCGCTGTC GGCCTGCGGC TCTTTCAAGG AAGAATTGCC GCCCGGCAGC TTCGTGCTGG TCGACCAGTT CGTCGACCGC ACCTACAAAC GCGAGAGTTC GTTCTTCGGC AAGGGCTGCG TCGCCCACGT CTCGATGGCG CACCCGGTGA GCCCGCGGCT GCGGATTCAT CTCGCCGCCG CCGCCGAGGC CGAGGGCATC GCGATGGCGC GCAGCGGCAC GTATCTGTGC ATGGAAGGCC CGCAATTCTC CAGCTACGCC GAGAGCATCA CCTACAAGCA GGCCGGCTAT TCGGTGATCG GCATGACCAA CATGCCGGAG GCCAAGCTCG CCCGCGAGGC CGAGATCTGC TACGCCTCAG TGGCGATGGT GACCGATTTC GACTGCTGGC ATCCCGACCA TGACGCGGTG ACGGTGCAGG ATATCATCCG GGTGCTGACC ACCAATGCCG AGAAGGCGAA GAGCCTGGTG GCGCGGCTGG CGCGGGATTT CCCGCGCGAG CACGAGGCCT GCCCGATCGG CTCCGATCGC GCGCTTGACA CCGCGATCAT CACCCAGCGG GAGGCCCGCG ATCCGGAACT CTTGAAGAAA CTCGACGCGG TGGCGGGAAG GATTTTGCGC GCATGA
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Protein sequence | MTTAVLGIIG GSGIYDLPGL EDVRDEAIAS PWGEPSSSVR RGSISGLPIV FLPRHDKGHR LSPSDINYRA NIDVLKRAGV TDLISLSACG SFKEELPPGS FVLVDQFVDR TYKRESSFFG KGCVAHVSMA HPVSPRLRIH LAAAAEAEGI AMARSGTYLC MEGPQFSSYA ESITYKQAGY SVIGMTNMPE AKLAREAEIC YASVAMVTDF DCWHPDHDAV TVQDIIRVLT TNAEKAKSLV ARLARDFPRE HEACPIGSDR ALDTAIITQR EARDPELLKK LDAVAGRILR A
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