Gene RPC_4937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4937 
Symbol 
ID3973854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5507839 
End bp5508714 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content66% 
IMG OID637928050 
Product5'-methylthioadenosine phosphorylase 
Protein accessionYP_534778 
Protein GI90426408 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0005] Purine nucleoside phosphorylase 
TIGRFAM ID[TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.456105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG CCGTTCTTGG CATCATCGGC GGATCCGGGA TTTACGATCT GCCCGGGCTG 
GAAGACGTTC GCGACGAGGC GATTGCCAGC CCGTGGGGCG AGCCGTCGTC CTCGGTGCGG
CGCGGCAGCA TCAGTGGGCT GCCGATCGTG TTCCTGCCGC GCCACGACAA GGGCCACCGG
CTGTCGCCCT CCGACATCAA CTACCGCGCC AATATCGACG TGCTGAAGCG CGCCGGCGTC
ACCGACCTGA TTTCGCTGTC GGCCTGCGGC TCTTTCAAGG AAGAATTGCC GCCCGGCAGC
TTCGTGCTGG TCGACCAGTT CGTCGACCGC ACCTACAAAC GCGAGAGTTC GTTCTTCGGC
AAGGGCTGCG TCGCCCACGT CTCGATGGCG CACCCGGTGA GCCCGCGGCT GCGGATTCAT
CTCGCCGCCG CCGCCGAGGC CGAGGGCATC GCGATGGCGC GCAGCGGCAC GTATCTGTGC
ATGGAAGGCC CGCAATTCTC CAGCTACGCC GAGAGCATCA CCTACAAGCA GGCCGGCTAT
TCGGTGATCG GCATGACCAA CATGCCGGAG GCCAAGCTCG CCCGCGAGGC CGAGATCTGC
TACGCCTCAG TGGCGATGGT GACCGATTTC GACTGCTGGC ATCCCGACCA TGACGCGGTG
ACGGTGCAGG ATATCATCCG GGTGCTGACC ACCAATGCCG AGAAGGCGAA GAGCCTGGTG
GCGCGGCTGG CGCGGGATTT CCCGCGCGAG CACGAGGCCT GCCCGATCGG CTCCGATCGC
GCGCTTGACA CCGCGATCAT CACCCAGCGG GAGGCCCGCG ATCCGGAACT CTTGAAGAAA
CTCGACGCGG TGGCGGGAAG GATTTTGCGC GCATGA
 
Protein sequence
MTTAVLGIIG GSGIYDLPGL EDVRDEAIAS PWGEPSSSVR RGSISGLPIV FLPRHDKGHR 
LSPSDINYRA NIDVLKRAGV TDLISLSACG SFKEELPPGS FVLVDQFVDR TYKRESSFFG
KGCVAHVSMA HPVSPRLRIH LAAAAEAEGI AMARSGTYLC MEGPQFSSYA ESITYKQAGY
SVIGMTNMPE AKLAREAEIC YASVAMVTDF DCWHPDHDAV TVQDIIRVLT TNAEKAKSLV
ARLARDFPRE HEACPIGSDR ALDTAIITQR EARDPELLKK LDAVAGRILR A