Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4919 |
Symbol | |
ID | 3973802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5489181 |
End bp | 5489900 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637928032 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_534760 |
Protein GI | 90426390 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.214462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTCG AACACACCAC CAAGGCTTTC GACAGCGACC TGCAGGAACT GACGCGTCTG GTCGCCGAGA TGGGCGGCCT CGCCGAGCGC CAGATCGTGG ATTCGGTCGA CGCCCTGACC CGCCGCGATG TCGCACTCGG CAGCCGTGTG GTCGCGGCCG ATGCCGAGAT CGACCAGTTG CAGCGGGTGA TCGAGGAGCG CGCGGTGCTG ACCATCGCCC GGCGCCAGCC GATGGCGGTC GATCTGCGCG AGATCGTCGG CGCGTTGCGC GTCGCCACCG ATCTGGAGCG GATCGGCGAC CTCGCCAAGA ACATCGGCAA GCGCGTCAAC GCGCTCGACA ACGACTTCCA CCCGCTGAAA CTGATCCGCG GCCTCGAACA CATGACCGAC CTGGTGCAGT CGCAGGTCAA GGCGGTGCTC GACGCCTATG CGGCGCACGA CCTGCCGGCT GCGATGGTGG TGTGGAACGG CGACGAGGAG GTCGACGCGA TCTGCACCTC GCTGTTCCGC GAACTGTTGA CCTATATGAT GGAAGACCCG CGCAACATAA GCTTCTGCAT TCATCTGATG TTCTGCGCCA AGAACATCGA GCGGATCGGC GACCACGCCA CCAACATCGC CGAGACCGTG TTCTACATGA TCGAAGGCCA GCAGATTCTC GACAAGCGGC CGAAGGGCGA CATGACCAAT TTCGCCGACG CCGCCCCCGG CAACACATGA
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Protein sequence | MAFEHTTKAF DSDLQELTRL VAEMGGLAER QIVDSVDALT RRDVALGSRV VAADAEIDQL QRVIEERAVL TIARRQPMAV DLREIVGALR VATDLERIGD LAKNIGKRVN ALDNDFHPLK LIRGLEHMTD LVQSQVKAVL DAYAAHDLPA AMVVWNGDEE VDAICTSLFR ELLTYMMEDP RNISFCIHLM FCAKNIERIG DHATNIAETV FYMIEGQQIL DKRPKGDMTN FADAAPGNT
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